P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATGCGAGACGCGTGGCTGCCGTGTCCCGTGGGAGACCG12.30519e-06
AAATGCGCAGCGGATCGTGGGTAGGTCTGTGAGTGGAGTT12.30519e-06
AAATGCGCGGAAAGCGCAGGATGCGGGAGCGTGGGAGGCT12.30519e-06
AAATGCGCGTGGGGGTATCACGTTCCGCGGGAGCGCGCCC12.30519e-06
AAATGCGCTGGTGAGGCACCCACGCGAGGGGTGGCCGTGT12.30519e-06
AAATGCGCTGTCCCACTCACTTCACATGCGTGACGTGCGT12.30519e-06
AAATGCGGTAGACCGTGAACTTGTTGAACTCTCGTCCACG12.30519e-06
AAATGCGGTGCGTGGGAGGTCCGTGGCGGAGTGTGGTCGT12.30519e-06
AAATGCGTGAAGACGAGTTGGTGGGGTTGCGTGGGATGAG12.30519e-06
AAATGCGTGAAGGCATTTTCCTTCGCGTCATTTTGCGTGA12.30519e-06
AAATGCGTGCATCAAGCGTGGGCCATGAGGGTATGCCGAT12.30519e-06
AAATGCGTGGATTACCGGTGTGGCGAGGGTACGTTACACT12.30519e-06
AAATGCGTGGATTAGCGATACCGTGTGGTGAAGTGGACCT12.30519e-06
AAATGCGTGGGAGCGTATCAGAAGGTTATGTCAGTGGCTA12.30519e-06
AAATGCGTGGGAGTCGCGTGGGTGTCTGGTGAATGACGCG12.30519e-06
AAATGCGTGGGCGGGAAGCACCGGCGGTACTGCGGGTGGC12.30519e-06
AAATGCGTGGGGGAGAGCGTATGCGTGGACGTTAAGAATG12.30519e-06
AAATGCGTGGGGTGAAGACTTTGGTTGACGGACGTTACGT12.30519e-06
AAATGCGTGGGTACGGCGTAGGGTTCTTCCCACGTCCCCA12.30519e-06
AAATGCGTGGGTGGCGAGACTACAATTTGACGTTCTTTCG12.30519e-06
AAATGCTCGCGTGGGTGTCCCCGTGACGCAAGAGTGGAAA12.30519e-06
AAATGCTGGACGTGGGTATGGTGGCGACAGATGTTCGTTC12.30519e-06
AAATGCTTCGTGGGAGGCAGAATTGTTCCACTCGTGGGTC12.30519e-06
AAATGGAATTCAGGAAACGTGAGCGTGTCACGCGTGGAGA12.30519e-06
AAATGGACAAGCGTCAGTACCCACGCGTGAGATTATGACA12.30519e-06

Read fractions use all reads in this source file as the denominator.