P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATGGTATAATAGCGACCACTTGCGTGGGCGGCGCGTAG12.30519e-06
AAATGGTATATGCGTGGCCGTAAGCGTCAACGCGTGGGGG12.30519e-06
AAATGGTCCGTGGGAGAGTGGAACTTGAACAGGGTCGGGA12.30519e-06
AAATGGTGACGCGGGTTCCGTGGGCTTGGTCGAGGCGCAA12.30519e-06
AAATGGTGGTGCGTGGGTTTTTACTGGGAGAGTGGCAGCT12.30519e-06
AAATGGTGTGGGAGGGGTCGTGGGATGTTGCACGTGGGAG12.30519e-06
AAATGGTTACCAACGTTGCGTGGGAGTCTACATACGTCTT12.30519e-06
AAATGGTTCAGCGAATTGCATGCGTGGATCGGTGTGGACA12.30519e-06
AAATGTACTAGTCGCGCGCTGGAAGGATCCTCGTGGAGGC12.30519e-06
AAATGTAGTGTGGAACGTGGAAGCTGTGGAAAGTGGACGA12.30519e-06
AAATGTATCTATAGTGTTGGACTCACGCGTGGGTTCTAAC12.30519e-06
AAATGTATTAGCTTGATCCACGGGTGGGGACAGCGCGTAC12.30519e-06
AAATGTCACACGGGAGGTGGAACTCGTGAAAAGGTATTCC12.30519e-06
AAATGTCACGCGCGGGATGTTTGGTACCGTGGAGACATGC12.30519e-06
AAATGTCACGCTTATGCATGCGTGTTCCTGCGTGGGGGGG12.30519e-06
AAATGTCACGGATGGTCCCTGGGGTAGGCGTCACGGCACA12.30519e-06
AAATGTCAGGGGGCGGCTGCTGCACAGTTCGCGCGTGGAT12.30519e-06
AAATGTCCACACGATTTCCCGGCGTGGGCCCGGTGGAGTG12.30519e-06
AAATGTCCGTCCGCGTGACAGTGGACTTGAGCCTTTGTAG12.30519e-06
AAATGTCGTGGGGGAGTCAGAAGGTTTCTTTGGGATTTGA12.30519e-06
AAATGTGCGGTGGGGTTGTCGCGTGGGGCCGTGGCAGGCT12.30519e-06
AAATGTGGAAGTGGGGTGGGGTGTGGAAAGGTGGGTGGTG12.30519e-06
AAATGTGGAATGCGTGTCAAGAGGGTTTGCGTGGATCGTC12.30519e-06
AAATGTGGAGTGAGGCCGTGGGTGCGTGCCCTGGAGTTGA12.30519e-06
AAATGTGGATTGGTTTCTCCCACGCATGGAAAATCGTGGA12.30519e-06

Read fractions use all reads in this source file as the denominator.