P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATTCCACTGGCCGTATACCAGGGGACGAGGGATGTTCT12.30519e-06
AAATTCCAGGCTACCACTCGTGATAACTTGGTGCGTCACC12.30519e-06
AAATTCCCACGCGCGGTAATTGGGAAGCAACGCGTGTCCA12.30519e-06
AAATTCCCTGCACTCTACCCCCGCGTGGATGGCCGCGTGG12.30519e-06
AAATTCCGCGGAAGGTTGCGTGGCCTCCACCGTACAAAGC12.30519e-06
AAATTCCGCGTGATGTCGATATAGCGAATTGCGTGTCAAC12.30519e-06
AAATTCCGGGAACGGGTGTATTCCACGCTGGTCCTTCGCG12.30519e-06
AAATTCCTCGCGCGTGGAGATCGCTTGGTTACGCGGCTAG24.61038e-06
AAATTCGAAGTGTGCGTGGGTGAGGCATTGTGGGAGGATT12.30519e-06
AAATTCGCGCGTGTGTTTGTGGCACATTACACGAAAGACT12.30519e-06
AAATTCGCGTGATTAGGGTACACCACTCTCGTGGGAGGGT12.30519e-06
AAATTCGCGTGGGTGTCAAGGTCGTGAGTGTGGCAACATT12.30519e-06
AAATTCGGTGGTGATCCGGTGCGCCGGCACGTGGGGTGTT12.30519e-06
AAATTCGTGGCAGTGAGCGTGGCCGAACGCAGTGGATTCT12.30519e-06
AAATTCGTGTTACGAGTGCCTGTCCAGGATCGTGGGTAGT12.30519e-06
AAATTCGTTAAGCTCCCGTATCGTCAGTAGCGGCAGTATC12.30519e-06
AAATTCTAGCGAAAAGGACTAGATGGGTGCGTGGGGCACT12.30519e-06
AAATTCTCAGTATGCCGCTGCGCGTGGGCAGTTTGCGTGA12.30519e-06
AAATTCTCCGTTCAGGATCGCGTGGGTACCGTGGGTGCGC12.30519e-06
AAATTCTGGCATGCCAGAATATGTCGCGTGGATAAGGAGA12.30519e-06
AAATTGACGTAGGCGTGGGTGACGAGACCGTGTCCGTGGA12.30519e-06
AAATTGACGTGGTCAGCCGCACGTGGTTCGTGGGTACTGA12.30519e-06
AAATTGACTTGAGTGCCAGGTGCGTACCGGTCCGATTGTA12.30519e-06
AAATTGAGCCACGCGAGCGTCAACTCGAGGCCACGGGTGA12.30519e-06
AAATTGATAGGAGGACCCTTCATGGAAAGGGGGGCGGTGA12.30519e-06

Read fractions use all reads in this source file as the denominator.