P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACAAGCCCTACAGGGGTCGAGTCAAGAAGACACCAACTG12.30519e-06
AACAAGCTCGTGGAGGTGCGTGGGTGTATGCGCGCCGCTT12.30519e-06
AACAAGCTGCGACCGTGATTTGCGTGGGCTGTGTAGTGGT12.30519e-06
AACAAGGCCCTATCTATGACCCTATTCCACGCGTGGGTAT12.30519e-06
AACAAGGGAAGCGCGTGACGTGGGACTAGCTGTGCATAGT12.30519e-06
AACAAGGGGTAAAAGGTATGCTAAGCGGGGGTCGTCCCAT12.30519e-06
AACAAGGTCGTGGGACCGAGGGAAACGATAGTGGAGGGGG12.30519e-06
AACAAGGTGTGTCCACAGCGCCACGTTGGTGGCAGGTTAT12.30519e-06
AACAAGTCGCTTTAGCGGGCACGCGCGTGGGGCGTGACTA12.30519e-06
AACAAGTCTCGGCGTACTTGGAAGTGGGCTCGATCGTGGA12.30519e-06
AACAAGTCTTGATCACGTGACGTGGGCAAATAGTGGGTTT12.30519e-06
AACAAGTGACTGTCGTCGTGGGGCCCACGAGTGGGGTGAA12.30519e-06
AACAAGTGCCTTTTTATCTCGCACCTAGACAAACTGCTTA12.30519e-06
AACAAGTGGCGTGATTTCGCACGCGGGGCATTCGTGGCAG12.30519e-06
AACAAGTGGGGGGGGCGTGGACGTAAGCTCCGTGATTTGC12.30519e-06
AACAAGTGGTGACTTCCACGCGCGGAATATGCTGTGAGCC12.30519e-06
AACAAGTGTTGCGTGGAATTGTCATGGTGCGCGACGAGAA12.30519e-06
AACAAGTTCCCACGTAGCGTGGGTTTCGCACCGAGAGTGG12.30519e-06
AACAAGTTTGGGAAGCGTGCGTCACGCCGCGTGACGAGTG12.30519e-06
AACAATAATAAGGTAGTTGCGTGGGCACGCCACGTAAGTG12.30519e-06
AACAATACACGTGGAGTGTTTGGTGAACGTGGACGCGAGC12.30519e-06
AACAATACCCCACGATCACGCTCTGTTTCCACGCGGACAT12.30519e-06
AACAATCAAGCGGTAGACGCGAGGGTCGTGGAGCTGTGGG12.30519e-06
AACAATCACGCGTGGGTTATTGGAAAAGGATGTTCTATAA12.30519e-06
AACAATCACGCTGTGTATTGTCGTTCACCCACGGAGAGCA12.30519e-06

Read fractions use all reads in this source file as the denominator.