P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTGGAGTGGCGCATCGTGTCGTGGGATTATTGGAC12.30519e-06
AAAAGGTGGGGCTATCTGAGCGTGGGGTGTTCGCGTGTGG12.30519e-06
AAAAGGTGTGGAATTTCGTAGTGGGGGCATGCCACGCAAC12.30519e-06
AAAAGGTTGCCTAGTTGCTGTTTTGCTTGTCACGCGCTGT12.30519e-06
AAAAGTAAGAACAAGGTACCTTCGTGTAATGCGTGGGCGT12.30519e-06
AAAAGTAAGCCCACGGAGAGAGGCGCGTGTATTCGTGGTT12.30519e-06
AAAAGTAATAGAGCCCTTTTGCGTGGGGTCGCGGGACGCA12.30519e-06
AAAAGTAGGTGGGTTGTGACGGTTGCAGGTTGCGTGGGAA12.30519e-06
AAAAGTCAGCTCATTTCGTGGGGTAGACGTCCACGCGGGG12.30519e-06
AAAAGTCCACGTAGCGTGATGCCGCGTGGGTTCGAGGTCC12.30519e-06
AAAAGTCGATATGTGTGTGGCGGATGGTTTCCACGCGTGT12.30519e-06
AAAAGTCTAACGGACGCGTGGGGAGTCGTCGGTGTCCACG12.30519e-06
AAAAGTGCGAGTAAGCGTGGATCAAAGCTGATGCGACTTG12.30519e-06
AAAAGTGCGTGGGTGTATATGTAAGCTCTCAGAAGCCACG12.30519e-06
AAAAGTGGACCTCTTCTGTGGCTCGTGGGAAAGGAAGCAT12.30519e-06
AAAAGTGGAGTGGGAGTTGCTGTGGGTTGGTAGATGGCTC12.30519e-06
AAAAGTGGCACGTACGTGGATGTTACGTCTGGGTTTTGCT12.30519e-06
AAAAGTGGCGTGGCACTAATGGCGTGCGTGGAACGGCAAA12.30519e-06
AAAAGTGGGAGTGGGCGATTGCGCGTGGTGACTCGACAGC12.30519e-06
AAAAGTGGGGATGTGGCCGTATGCGTGGTAACTGTGCGTT12.30519e-06
AAAAGTGTAAGGTCCGTGACGGCCGTGTAGGGATGAAGAA12.30519e-06
AAAAGTGTACGGTTTTCATTTGTAATTGCGTGGGTGTGGA12.30519e-06
AAAAGTGTGACCTAGTACGTGGACGGTGAGAGCATCCGTG12.30519e-06
AAAAGTGTGGTCGGGTACTTCTGGTGCGTTACACGCGTGC12.30519e-06
AAAAGTTAAGCGGGCAGGTAATTGCCCATTTCGAAGTTTG12.30519e-06

Read fractions use all reads in this source file as the denominator.