P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACAGGTCGTGCGTGGTGTTGGTTCGTATCGCGCGTGGGA12.30519e-06
AACAGGTCTGAGCGTAACCATGCCCGTGGGCGCGAGGAAA12.30519e-06
AACAGGTGCGTGGACTCTAGGCGTTGCGTGGCGTGTAAAA12.30519e-06
AACAGGTGGAAATTTGTCCGCGCACGTGGCAAGAGTCCTT12.30519e-06
AACAGGTTATGGTTCGTGGAATGTAGATATGTGGGAGAGG12.30519e-06
AACAGTAGGGTGTGGGTGAAGTCGCCGTGACTGAGTGGAA12.30519e-06
AACAGTCAACTGGACACGCAGCGTGGCCTGCGTGGGAGGG12.30519e-06
AACAGTCATGCATTTTCGTGGGTGAATGCGTGACGTGGAA12.30519e-06
AACAGTCGTGCAGGGCCCGTGGATTAGTTGCGTTAATACA12.30519e-06
AACAGTCGTGCCCACGGGGGGGACCACGTGATCGTGACCT12.30519e-06
AACAGTCTGCGTGGGAGGACGAGCTAGTTGCCAGCCTCCG12.30519e-06
AACAGTCTGGTTGCGTGGGAGGTAGTGGGTAAGGCCCGAC12.30519e-06
AACAGTGACTTATTAACCATCGGGGGTTTGCGTGTCCACG12.30519e-06
AACAGTGCCACGGTCCGTGGAACGTGTCTGGACGAGGGCA12.30519e-06
AACAGTGCGTGGGACGCGGAGCGTAGGGGCGTGACTACCC12.30519e-06
AACAGTGCGTGGGGCAACACGGGAATGTTTTCGGGTGCGT12.30519e-06
AACAGTGGAATTCACGTTTCCACGGGCCGGGGCGTATAAT12.30519e-06
AACAGTGGGAGTGGGCAGATGGATCGGCGTGGGTTGATGC12.30519e-06
AACAGTGGGCACGCGTGAGCCGTGGCATTGGGTGTGGAAA12.30519e-06
AACAGTGGGCCAGCGACACGTCTTCCACTCGGAGTGGATG24.61038e-06
AACAGTGGGGGTCGTCACAGCGCTGCCACGCGGTGTAGTA12.30519e-06
AACAGTGGGTAGGCCCCATCCCAAGCGGTGTTGCGCGTGG12.30519e-06
AACAGTGGGTCCGAGTGCGTGGGTGTGGGTTGGGGGGCCG12.30519e-06
AACAGTGGGTGGCCCGTGGGGACGTGGGGTGGTTAGCCAT24.61038e-06
AACAGTGGGTGTTAAGCGAACGCTGCGGTCCGTGGAACTG12.30519e-06

Read fractions use all reads in this source file as the denominator.