P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACATGGTAGCAGGAGACCGTGGTCACGCGTGGGCAGGGT12.30519e-06
AACATGGTGTCGAAATGGGCGGGCGAGCGTGCGGATCAAA12.30519e-06
AACATGTATGCCACGCGTGGCCTGGGGGCTGTGTGTGACA12.30519e-06
AACATGTCCTCGTCACGCACCCACGGGAACCCCGTCAGCC12.30519e-06
AACATGTCCTTTTCGACTGTGGATCCTTGCGTGGAGAGGG12.30519e-06
AACATGTCGTGGGTTTAAGAGTTCGTTGTTAACACGGCCG12.30519e-06
AACATGTGCAACGAGTTGCGTGCAATCTCAAACGTGGAAC12.30519e-06
AACATGTGGCACGCGATCCACGAGTGGAGGTGAGACAATG12.30519e-06
AACATGTGGTGTGACGACCTTGTCACGACGAGTGGGTTAT24.61038e-06
AACATGTGTCCGAGGCGAATCCACGAGTGAGGAGCTAGAT12.30519e-06
AACATGTTAGCGTGGATTGGTGAAGCGCGAGTGGAAAGAC12.30519e-06
AACATGTTCGTGGAAGTTCCGTGGGTCGAATGTGTGGATC12.30519e-06
AACATGTTTGAACGTGGCATGTGCCATCTTGTTTAGGGTG12.30519e-06
AACATGTTTTAGTCCGTGGGGTGGTTACGAGGCAGGACGT12.30519e-06
AACATTAATTACGTTGACACGCGTGGGTCTCTGTGTTCAA12.30519e-06
AACATTACACGCGTGTATATGAAGATAATGCGTGTAGCGG12.30519e-06
AACATTAGTTCCACGTAGCTATCTGGGCTGTTTGGTCACG12.30519e-06
AACATTATTATCGGTGATGTTCACGAACCGGCCGAGGTTT12.30519e-06
AACATTCACGACTCTCCCCCTTTCGTGGGTATGTTGTCGC12.30519e-06
AACATTCACGGGGAATTGCGTGGAGTTCGTTCTTACGAGC12.30519e-06
AACATTCCACGGGAGCAAGGAGATGCGTGGATCTGAGGCG12.30519e-06
AACATTCCGTGATCGCGGCAGAGTGGGATGCAGAGAGTTG12.30519e-06
AACATTCGAGGGAGAGTGGGCTTCCGGTGCCACGCGTGGT12.30519e-06
AACATTCGCGGGTCTCTAGCGACCCGACTTTGTGCGTGGG12.30519e-06
AACATTCGGGGCTCTCCAGGGTTCTTGGTCAGGGTCAGGT12.30519e-06

Read fractions use all reads in this source file as the denominator.