P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACCCACGCGCGGATTTAGCCTCATTCCACGAAGCACTGG24.61038e-06
AACCCACGCGGAGTTCATGTGGACATGTGCATGACGAAGT12.30519e-06
AACCCACGCGGCAGCTGACCGGTGGTCCGCGGACCGAATA12.30519e-06
AACCCACGCGGGGACGTCATGGTGTGTTGGCGCTGATCCT12.30519e-06
AACCCACGCGGGGATGGGTGCGTTCGTACCCTTAAGCTAT12.30519e-06
AACCCACGCGTAGTGGGTGCGACGGAAGAAGTGCAGGCCG12.30519e-06
AACCCACGCGTGGAGGTCGGGGGGACCGGTCAACCCGCAC24.61038e-06
AACCCACGCTGGTTCCACGCGGAGAAAGGCTTGCATTCCA12.30519e-06
AACCCACGCTTATAGGCAAATTGGAGCCCTGAGACGTCCA12.30519e-06
AACCCACGGACATACGTGGAAGACGGTGCTTAGTGCGTGG12.30519e-06
AACCCACGGACCGTCGTGGAAGTAAGGTAGAGAATCTCTC12.30519e-06
AACCCACGGCCACTGGGTATAATGCGTGGGTCGAGACGCG12.30519e-06
AACCCACGGGATAAACGATGGGTGGGCCGTACCACGTGAA12.30519e-06
AACCCACGGGGCGAACAATGATTACACGTAGGTGAGTAAC12.30519e-06
AACCCACGGGTGATGTGAGTGCCACGCGTGATGGGGTCTA12.30519e-06
AACCCACGGGTGGCGTGGCGGCGTGGCGTGGAGGTCAGGG12.30519e-06
AACCCACGGTCGTCACAGGGGAGACAGCGTTTCACGCGCT12.30519e-06
AACCCACGGTGGGCGGGTGCACCAGTCTGGGGGGCGTGGA12.30519e-06
AACCCACGTAGTGTGCGCCGTGGAGGTCCTGGGGAGTCCA12.30519e-06
AACCCACGTCACGAGGAGCTGGTGGCGTTACGCCGACACG12.30519e-06
AACCCACGTCACGCGTGAGCCGTATCATGCGCATGAGATT12.30519e-06
AACCCACGTGAAGCTAAGTCGTGCCCGAGCACGTGGGTCA12.30519e-06
AACCCACGTGCTGTGTACTACCGACTGTCGCATTCCACGG12.30519e-06
AACCCACGTGGATGAATGGCGCCGTGGCCGTGGACTTTAG12.30519e-06
AACCCACGTTCAGTGTCGGTCGCGTGGCGTTCTTGTCCGT12.30519e-06

Read fractions use all reads in this source file as the denominator.