P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGATTGCGTGGGAGCAATGCGTGTTTATCGGTGTCGAC12.30519e-06
AACGATTGGGGTAACATGTCTGATTCGATCCACGCGTGTA12.30519e-06
AACGATTGGGTGGCGTCGTGGGGATGAAAGGCTGTCGCAC12.30519e-06
AACGATTTGCGGGGTAGGGATTCGCTGTCCACTAGTGGTG12.30519e-06
AACGCAAGAGTGTGCGTGGGCTCCTTCGTGGCACTCTGAC12.30519e-06
AACGCAAGCTGCGTGGTTCGGTAGCGGACATGCGTGGGTC12.30519e-06
AACGCAAGGGGGGCCACGCCGACGTGGGACGAGTGGGAGG12.30519e-06
AACGCAAGTCCACAGGACACGTAAGTGGTATTGGGTGCTA12.30519e-06
AACGCAATCCGTGGGGTACGTGGGGCTGCAATCGAAGCTC12.30519e-06
AACGCAATTTGGGCATTTCACGCGTGGAAGAGGCACGTGT12.30519e-06
AACGCACATACTTGGGCACGGTGCGTGGGTGAACGTGGTG12.30519e-06
AACGCACATGCACGCCTCTTGCGTGGACGCTCGTGACTTT12.30519e-06
AACGCACATGCCCACGAGTCCGTTGTGGGTTGCGTGGCGA12.30519e-06
AACGCACCCGTGGCTGCGTGGGTCACGTGGGCATAGGTAG12.30519e-06
AACGCACGGCGATGCGTGGGACCGAGGTTTAGGGAATCCA12.30519e-06
AACGCAGAGCTGACTATTGGAAGAGTGGGGGCCTGGTTAC12.30519e-06
AACGCAGCAAGATCGGTCACCGCGTGGATCGTGTTACACT12.30519e-06
AACGCAGCCACTGCGTGGGATCGCTCTGTCCGTCCTAGCC12.30519e-06
AACGCAGGACATGAAGCCACAGCAGGCCGCGTGGGTGGCG12.30519e-06
AACGCAGGGCGTTTATCACTTGCGTGGACGTACCGCACGC12.30519e-06
AACGCAGGGGGATGACTACGACGCTGAGCGGGGGCGAGGA12.30519e-06
AACGCAGGTGGTGGGCTGCACGATCCACGCAACAAACGCC24.61038e-06
AACGCAGTCCACGCGGTAACACGCGTGACGCCTGAATCAG12.30519e-06
AACGCATAACAAGGGTTACCCACGCTGGTGTAGATCGTGT12.30519e-06
AACGCCACGAAGTGTGTGTGCGTGGGGTGTGGGGATTGGG12.30519e-06

Read fractions use all reads in this source file as the denominator.