P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGCGAGGATTACGTGGGGCTGGTCCTGCGTGGGTGCAT12.30519e-06
AACGCGCAGGCTGTGCAAATTCCACGCGTGTAGAGGTGCT12.30519e-06
AACGCGCCCACGCGGGGGGCATGTAGGGCTCCCGGGTGGG12.30519e-06
AACGCGCGCCGCAGGAATCCACGCGTGGCGCGTGTGTTGA12.30519e-06
AACGCGCGTGGGCTGCGTGGAGTCTTGCGTGGCAGTTCGT12.30519e-06
AACGCGCTCTGATGTGCGGTTGGCAGTGGTCGTCCACTCG12.30519e-06
AACGCGCTTGTCATGCAGTGCGTGGGTGTCGTCTCGTGGA12.30519e-06
AACGCGGACGCGTGGGCCTTCCGGACACGTCGGGGGTGCG12.30519e-06
AACGCGGCCAAGGGTGAGTGCACGGAATCACGACGTTGTC12.30519e-06
AACGCGGCGACTGTATCGTCCCACGCTGTGGGTCCTCTTC12.30519e-06
AACGCGGCGCGTGGGACCATCTCGTGGTGTGGGTGGGTTC12.30519e-06
AACGCGGCGTCCACGGAACTGGGCGGGTGGGGCTAGTGTG12.30519e-06
AACGCGGGCAAGCGCGACCCCACGGGAGTGGCATTTTCGA12.30519e-06
AACGCGGGCATCGTAGCGCGTCTGGTGAGGTCCACGCGTG12.30519e-06
AACGCGGGCCCAGGTGTACCCTGCGTGGAAGGCTAACTTA12.30519e-06
AACGCGGGTGGGGCTGGGTGGTTCGTTCAGGGGAGCGTGA12.30519e-06
AACGCGGTAGGTCGTGGGCCAACGCGGTATTAATTTCACG12.30519e-06
AACGCGGTCCCCTGTTGAGCGTACGTGGGAGTGGGGATTG12.30519e-06
AACGCGGTCGCGCAAGTTGCGTGGACGTGGGGATTCATGC12.30519e-06
AACGCGGTCTATTCGGGTGTATCCAGCCAGGGCCTGAGGT12.30519e-06
AACGCGGTGCTGCGTGGGACGGGGTCGTGGGGACTGTTCC12.30519e-06
AACGCGGTGGGGTAATCACGCGCAATCACGTGGACGCATG24.61038e-06
AACGCGTGAGTGTATCGCGTGGGTGATATGTGAAGGGCCA12.30519e-06
AACGCGTGATGACTGTGCGGGGGGCGTGTTTGGGACGGCT12.30519e-06
AACGCGTGCGACGCTGCATGTGCGTGGAGGTCGGAAGGCT12.30519e-06

Read fractions use all reads in this source file as the denominator.