P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGGGACACTGGCCGCGATCTGGGCCTTTGGGCGTGGAT12.30519e-06
AACGGGAGATGATGTGACCGTTACACGCGTGGGGTAGCGC12.30519e-06
AACGGGAGTGAGTAGTTAGCGCCGTGGAACCCAGGTTTCG12.30519e-06
AACGGGATTGTTCCACGCGCATTGCAAGTGGCGTGTATTA12.30519e-06
AACGGGCAAGGAGGGAGGCATTGGAGTATCGGTGTGGTCA12.30519e-06
AACGGGCACATAGCAGGGAGTGTGGACGGGCGTGGAGGGA12.30519e-06
AACGGGCATAGACCGGCCAGTAGTGGGGTGCGTGGGTGCT12.30519e-06
AACGGGCATGCTGACGGTGGGATTGCCACGCAGTCTCGAT12.30519e-06
AACGGGCATTCGTGGATGGCAAATGTAGGTCACGCGTGGA12.30519e-06
AACGGGCCCCGTGACGGTAGAGTTGGTCCCACGGGGCAGG12.30519e-06
AACGGGCCTGTGGCTATATCCACCCGTGGGGGACGCGTTC12.30519e-06
AACGGGCGGGGGGAGTCGGGTGTCGCGTGGCTGAAGGTTG12.30519e-06
AACGGGCGTGGATCCTACGAGGAGGGAGTGGGTGATAATG12.30519e-06
AACGGGGAGAGGACGCACTTGAGGAGCCCGTGAATCTTAT12.30519e-06
AACGGGGCTCGGTTGTGCGTGGCCTGTGCGTGGGTTGTGA12.30519e-06
AACGGGGGATGCGACAGGTGGGGGGCGGTGCTTTGCAGTG12.30519e-06
AACGGGGGGATGCATGCGCGTGGGGCGTGGTTTGGCGTGT12.30519e-06
AACGGGGGGCTCCAGGCTGCGTGGGGGCGACGTGGGTGGG12.30519e-06
AACGGGGGGTCGTGACGGCTATCGACTGCCGTGGTTTTCA12.30519e-06
AACGGGGGTTCCACTGAGGGAGGGCGGTGTCCGTGGGAAT12.30519e-06
AACGGGGTCCAGTTAGCTTCCGCGTGGCTCGACGGGGGCA12.30519e-06
AACGGGGTGGATCGTTTCACAGTGGGACCACGCGTTATCT12.30519e-06
AACGGGGTGTGGACACGCTCGTGGGGTGGAGAGTGGAGTA12.30519e-06
AACGGGGTTCTTTACAGACCTTGTCCGTGGGTGGCTTGAT12.30519e-06
AACGGGGTTGTGAATCGTGAAACGCGTGGGTGGCTAGCCG12.30519e-06

Read fractions use all reads in this source file as the denominator.