P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATGGGGTTGTGGTGGTTCGGACGGGTCGCGTGTTAGT12.30519e-06
AAAATGGGGTTGTTTGAGGAAGTCCACGGGTGGGCTGCGA12.30519e-06
AAAATGGGTGCGTGGCAGAGGGAATGTACACGTGTTCTGC12.30519e-06
AAAATGGTCGGCGTGGGCGGGCCAGGGGACGGTGTCCACG12.30519e-06
AAAATGTGGGGGGATTTTGGCAGTGGGTTAGCGTGTTATC12.30519e-06
AAAATGTTAAAGGGTGGACTGCACCTGGTTTGCGTGGAGC12.30519e-06
AAAATGTTCGCGGATAAGTGTTGTGATAGTCTCGCGTGTT12.30519e-06
AAAATGTTGCTCTCCGTGGGTAACGGTATGGGTGGCAAGG12.30519e-06
AAAATTACACGAAGTCGTGGGTTTTAACTGCATTCTGCGC12.30519e-06
AAAATTACGCGGTCACGCGTGCAGGCCTGAATTGGCGTGG12.30519e-06
AAAATTCAGGGTCCGTGGCCGTGACTGAACGACTAGGGCT12.30519e-06
AAAATTCAGTGGGTCACGATGTCTCGTGGATCGTGGGTCG12.30519e-06
AAAATTCCAACGTGACCGTAGGGTCAGGGAGGATTCCACG12.30519e-06
AAAATTCCACAGTGGGACGTCCACGAGTCGTGCAAAGGAT12.30519e-06
AAAATTCCCACCCGTGATTCTGGTTTGCGCGAGTTGCGTA12.30519e-06
AAAATTCGTACTCTGCAGTACAGACTGCTGACGTAGGTGC12.30519e-06
AAAATTCGTAGAGTGCGTGGGCATCAGAGTGGGTGGGGTA12.30519e-06
AAAATTCGTCTGTGGACGGGCGACCAAGCCTCGTGGTGGA12.30519e-06
AAAATTGCACGCGTGGATGTGGACCGTGGAGCGTGCGCTG12.30519e-06
AAAATTGGCAGCCACGCGCGTGGGAATAGCGGAGCACCGC12.30519e-06
AAAATTGGTTGTCACGCGTGTGATATGAGCGGCGTGGGTC12.30519e-06
AAAATTGTGTAGAATGAATCCACACCTGCGACGCAATGGG12.30519e-06
AAAATTTCGATCCCTGTGAGGAAGGTGAGTAGGGAGTTGA12.30519e-06
AAAATTTGCGTGGGCTAGTGGAGAGTCCACGCGTGTCACG12.30519e-06
AAACAAAAGCCACGAGCACCGCGTGGGTAGCTGAGCATCG12.30519e-06

Read fractions use all reads in this source file as the denominator.