P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACTCGCGGACCCACACGCGTGGGACAGTCGACATACAGC24.61038e-06
AACTCGCGGGTGGGAGAGGGGCATGCGTGGGATTAGCGTG12.30519e-06
AACTCGCGTCGTATAGTAGGCAGTCCACGCCAATGCGCTC12.30519e-06
AACTCGCGTGGAAAATGGGACAGGGCAGGGTAAGGGCCCG12.30519e-06
AACTCGCGTGTGGAGGGGTGCGCCGAGTGTTGTTAGCTAA12.30519e-06
AACTCGCTAGGACCCACGCGTGCATATCTGGTTGGTAGTC12.30519e-06
AACTCGCTTTGCACGTAAAGCTTGCGCGTGGACGTGGCTA12.30519e-06
AACTCGGCATCCCGTGAGGTAGTGCGTTAGCTGTCACTCG12.30519e-06
AACTCGGCGAGAATCTTGGCCGACGTATGTTGAGATGGCG12.30519e-06
AACTCGGGCGCGTGGATACCGTACTTCTCGTGCGCGTGGG12.30519e-06
AACTCGGTGCGTGGGAATCTGCAGTCCCGTGTGCGTGGTG12.30519e-06
AACTCGTACGCATCACGCACGGTGGGGGGTCGCGTGGGAT12.30519e-06
AACTCGTCATTGGGTGTGGAACAGAAACCCGAACGATTCG12.30519e-06
AACTCGTCCACGCAATTGAAGACTGCCTCGTGGGTTGGCC12.30519e-06
AACTCGTCTGTGCGTGCAGAGTAGAGTGGGTCGGTGCGGT12.30519e-06
AACTCGTGAGAGTGTTTGCGTGCCACGCGTGACAAAGTTA12.30519e-06
AACTCGTGGACCGGGGGCACGGATTATGTGTGAGTGGAAC12.30519e-06
AACTCGTGGACTTGTACTTGTGTGCGACTTTATCTCGTGT12.30519e-06
AACTCGTGGATATATGTTGTGGTGGGGACGGGCAATACTC12.30519e-06
AACTCGTGGGAGGAGTCTCTCCTGTCGTGGAAATATCGTT12.30519e-06
AACTCGTGGGCGCGAGTAACTTCCCCCACGGAAGTGGGTA12.30519e-06
AACTCGTGGGCGTCGAGAACGTGGATCGGTTGCGTGGGTT12.30519e-06
AACTCGTGGGGTCGGGGGAGGCCGCGCTCGTGGATTTAAC12.30519e-06
AACTCGTGGGTTACGGATGGGGGTATAACGTTCGTGGGCG12.30519e-06
AACTCGTGGGTTATTGTGAGCGTGGAGTGCACGGCTGAGG12.30519e-06

Read fractions use all reads in this source file as the denominator.