P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACTGGCGTGGTCCCAGTTTGTTGTGCGTGGGCGGGGTAG12.30519e-06
AACTGGCTCGAGTATTAAGGCGTGTCCCGCGGCGGGGAAT12.30519e-06
AACTGGGAGTATTCACGCGGCAGTCCACGAGGTTCATGTG12.30519e-06
AACTGGGATAACACGCGGAGTGAGTGGTGGTCGTGCATCG12.30519e-06
AACTGGGATGCGTGGGTTTCATGCGTGGGCAACCTTGAGC12.30519e-06
AACTGGGCAGTTCCACGCGTTAATGAGTGCGTGTTTCAGG12.30519e-06
AACTGGGCGAATTGGCGTGGCGTGGGATGGTCGTGGGATT12.30519e-06
AACTGGGCGTCGATCCCACGCGTGGCAAGGGTGGTTTACT12.30519e-06
AACTGGGCTGTCACGTACACGCGCCCTGGGGAACGTGGGT12.30519e-06
AACTGGGGATGTCGCAATCGTGACTTATGTGGGAGTCCCA12.30519e-06
AACTGGGGCGCCACGCGTGGAAGGGTCCTGGTTGTTTGAC12.30519e-06
AACTGGGGGGGTCCGTGGGAGCGCAGATTGTGGGTGTGGG12.30519e-06
AACTGGGTAGTTTCGGACCACATTGCGTGGGGTGTCGGAC12.30519e-06
AACTGGGTGGGTACCTGTCGATGCGTGGGGTTATCGATGC12.30519e-06
AACTGGGTGGTAATAGAAGGGAAAGAGTGTGCGTGGGTGT12.30519e-06
AACTGGTACGCGTGTATATGTGCGTGGCGCGCCACCAAAC12.30519e-06
AACTGGTACGTGTAAGATACCCCACGCGTGACGTGGTATG12.30519e-06
AACTGGTATGAGAGCGTGACCTGCTGGAGCACCGTGGGTA12.30519e-06
AACTGGTATTTCGTGGCCCTTTGGGATCTGGGAGCACGCG24.61038e-06
AACTGGTCGGGGGGCAAGTGGATTTGTGAGTCTTTCGTGT12.30519e-06
AACTGGTGGAAGTGGGCCGTCTCAGGGGCGTGACAGTGGG12.30519e-06
AACTGGTGGACTACGTGGCGTTGCTAGGCGGTCCGTGTGA12.30519e-06
AACTGGTGGGCACGGCTGCGTGGGTCATGGGGGGGCATGG12.30519e-06
AACTGGTGTCGCGCGTGGGAACGTGTTAAGGGGTAAGGGG12.30519e-06
AACTGGTGTGGGTACCTATGATCCACGGGTGAATATCTGT12.30519e-06

Read fractions use all reads in this source file as the denominator.