P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGAAAAGTGGGCCTACTGGTTGATGCGTGGGGGCTATTT12.30519e-06
AAGAAAATCAGTGTGTCACATACTTGCTTCTCGCGTGGGC12.30519e-06
AAGAAAATCGTAGTAGTGGGCGTGTCCCACGCGAGATGGT12.30519e-06
AAGAAAATGAAAGTCACGTGTCGTGGATTCGAACCTGGGG12.30519e-06
AAGAAACCGTCTTATAGTTTGTATCAGTGCTGTGTGGATT12.30519e-06
AAGAAACGTAGAGTGGCGTGGAAATGTAGCGAGCTGAAAC12.30519e-06
AAGAAACTCGCGTGTTGCGAAGCTATAGCGATGCGTGTAT12.30519e-06
AAGAAAGAGTTCGGTACGCCGTGATGGGGGGAGGGGTCTC12.30519e-06
AAGAAAGCCACGTGGACGTCGGTCGTGGAGGGTAAGGCCA12.30519e-06
AAGAAAGCCATCAGCCACGTAAGTGCCACGCCGGAAGTAG12.30519e-06
AAGAAAGTGATTGCACGCGAGGGGACAACGGCGCGTGGAG12.30519e-06
AAGAAAGTGCGTGTCGAACTCCTGTGGAGGGTCAATTCCA12.30519e-06
AAGAAAGTGGGACTGTTGGCCCCACGCGTTGAATGCTGAC12.30519e-06
AAGAAATAAAGTGGTATGGCGATTTATGCACGTCGCTGAA12.30519e-06
AAGAAATACACTCGTGGGGGGCCAGTGCGTGGGCAGTTGC12.30519e-06
AAGAAATCACGGGGCGATTGGTGTATTCCACGAACTAGGG12.30519e-06
AAGAAATGGTATCGACGCTGCGTGGGTTGTGGGTCTGTAT24.61038e-06
AAGAAATGTGTGGAATCTAGCGTGGGAACGTACGTGGAAT12.30519e-06
AAGAACAATGCCTCCTTAATTGTGGGGAGCAGCTTCCACG12.30519e-06
AAGAACACGAAACTGTCAACGTACTGTGGGGCCGGCCACG12.30519e-06
AAGAACACGCGTGCTCTTACAAGGTATAAGGTCGTGGGTG12.30519e-06
AAGAACACGGCACTTTAGCGGCTTTTGGGCGTGGAAAGGG12.30519e-06
AAGAACACGTAGGTTGTGTGTTGATGCTGCGTGGAAATCT12.30519e-06
AAGAACACGTGGCGTGGGCCTGGCTTGGTTGGGCGCTGGG12.30519e-06
AAGAACAGCCACGCGTGGGAGTGGGAGGACGCCTATCTTC24.61038e-06

Read fractions use all reads in this source file as the denominator.