P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGAAGAATTCCATGCGTGGCTGCAGTGATCCCGTGGATA12.30519e-06
AAGAAGACCGTGCATGTGTCACGCGTGTGGGCCGTGGACG12.30519e-06
AAGAAGAGGGGCGATGGACCCGCGGAGGGGGCCGGATACA12.30519e-06
AAGAAGATAGTGGGTTACAGTCACCCGTGGAGCGTCGGTC12.30519e-06
AAGAAGATGCGTGGATTGAGTGTACAAAAAGGCTAGTTGT12.30519e-06
AAGAAGCAGAGGGACTCCGCGTGGGCTCGATGGGTTTCCG12.30519e-06
AAGAAGCAGCGTTTGCGCGTGAACCGTGGGCCCCGCGTGG12.30519e-06
AAGAAGCCACGCATGCGTGGGTCTCTTAAGCGCTGTCAAT12.30519e-06
AAGAAGCCATGGCCGCGCGTGCAGGGCGGTGCGTGGGACG12.30519e-06
AAGAAGCCGCATCGATTGGGGCGCTGCGTGGGTTATGCCT12.30519e-06
AAGAAGCCTTGTCCACACCTTCTATGGAATGCTGTGTTAC12.30519e-06
AAGAAGCGTGATGGGTTGCGTGGGGGGCGTAGGTCCCACT12.30519e-06
AAGAAGCTCGACGTGGACCGTCGTTCCACTCGTGGGAGGG12.30519e-06
AAGAAGGAGATTACACGTACGAGTAGGCCCGCGTGACCGT12.30519e-06
AAGAAGGATCCACGCAGCGTGATTTTGTGGGGTTCCGGAC12.30519e-06
AAGAAGGCCACGCGCGAATTTAAGAATCGTCGTGGAAGTG12.30519e-06
AAGAAGGGCGTGACTGCTAGGTATTCCACGCGTCAGCTCG12.30519e-06
AAGAAGGGTAATGTGTTCTGTGGAATGTTCCATCTCCTCG12.30519e-06
AAGAAGGGTCAAGAATGGTCTTTGGAGCGTGGGAGTGGAA12.30519e-06
AAGAAGGTCCACGCGTGGAGAGGACGACTCCTCGGAATTC12.30519e-06
AAGAAGTAGCCGCGAGCCTCGCGTGGAATGGCAGGAGACA12.30519e-06
AAGAAGTAGCCTTAGACGGGTAATTCCACGCGTGGTGGTG12.30519e-06
AAGAAGTATAGGCAGTCTGCGTGGCGTGAAGCGGGAGTCA12.30519e-06
AAGAAGTCGCGCACGCGTGGGGCTGTTTCTTCGTTCCACT12.30519e-06
AAGAAGTGCGCTGTGAAAAGTAGGCTTGACAGTATCGTCT12.30519e-06

Read fractions use all reads in this source file as the denominator.