P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGAGATGTGGATTGAGTGGATGTGCTGCCGTGGGGGGCG12.30519e-06
AAGAGATTGTACACGGGCGTGGATGTGCTCGAAGGAGTTG12.30519e-06
AAGAGCAAGTGGGTGGGTCCGCGGAGGGTGTTCGTGGGTT12.30519e-06
AAGAGCACGTACGAGATATTGCGGGGAAGCGGGCTTTTTG12.30519e-06
AAGAGCACGTGGGGCAGGGAGGTTCGCGCGTGGGACTTGC12.30519e-06
AAGAGCAGAGTGGGTATGCAGGTCCACGCATTTACGTGTG12.30519e-06
AAGAGCAGGTTGTGAGCCTCGTGACGGGCGTGGACGGGCA12.30519e-06
AAGAGCAGTTGATAGTGGGTTTTCGTGGGTGTGAAAGCCT12.30519e-06
AAGAGCCACGGGATGCGTGGAGTACGTGAGGGGGAATGAA12.30519e-06
AAGAGCCATGTTGTTCCACGCCGTTGGTGTGGGAGTGCTT12.30519e-06
AAGAGCCCGTCCGATAAACGGAGGTCGCGTGTAGCTCCGC12.30519e-06
AAGAGCCGATAGTGTTAGGTTCCGTGGATGCACGTGAAGT12.30519e-06
AAGAGCCGCCGTCACGAGGATTATTGCCCCACGGAGGAAG12.30519e-06
AAGAGCCGGAGCTAACATCAAGGTGTGGGCTTCGTGGGCC12.30519e-06
AAGAGCCTTGGGGTCGACGCGTGGACGATTACGTGAGTTT12.30519e-06
AAGAGCGAACGCTCGTGGGGAGAAATGTTACGGTGGGTCA12.30519e-06
AAGAGCGAGTTAAAATGCCAGCGTAATATGAAGCGTGGGT24.61038e-06
AAGAGCGATGTTGATCTCGGGTGTGACGTGGGGACGGTTG12.30519e-06
AAGAGCGCCGGGGCTGCTTACTAATCACGCGTGGGATCCT12.30519e-06
AAGAGCGGACCTGGTGTGGGTTAGCGTGGAATGCCATCGG12.30519e-06
AAGAGCGGGCAGGATGGCACGCCTTAGATGAAGTCACAGC12.30519e-06
AAGAGCGGGGCCGGTTTGGTTCGTGATCGCCGTGGGTATT12.30519e-06
AAGAGCGGGTGGAGGATGGTCAGCTTGATTCACGGGGATC12.30519e-06
AAGAGCGGTCCCAGTCACAGTGGGGTTTTCGTGGAAGCCG12.30519e-06
AAGAGCGTATCACGGGGCGCGACGGTTTTAACCAATCACG12.30519e-06

Read fractions use all reads in this source file as the denominator.