P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCACCGTGGGATGTACGTGGATGGCGTGGGCATCGCGT12.30519e-06
AAGCACCGTTCGGTCGTGCGTGGGGCGTCAGGAACGGAGG12.30519e-06
AAGCACCTAGAAGCGCGTGGGAGGCTGCACCGTCACTCCA12.30519e-06
AAGCACCTGCGTGGGCGTATCGTGGGACATGTGAACTCTG12.30519e-06
AAGCACGAGTGGAACTAGGGGCCACAAAAGAGCGTATCGA12.30519e-06
AAGCACGCAGACGTGGGAAGGTCCGTGGGCGTTACGACCG12.30519e-06
AAGCACGCGGAGGTGCGAACGTCCGCTCAATTGGCGTGGT12.30519e-06
AAGCACGCGGGGAATGGCCGGTAGGGCGTGGGCGTGGGAG12.30519e-06
AAGCACGCGTCATTTGGGTGGGGAGGAAGCTTGCCGTGTA12.30519e-06
AAGCACGCGTGGGAAGTAGGTAGGTCCGTGGGAGCGGCGG12.30519e-06
AAGCACGGAGCGCACGGTAGTGTGGCAATGTATGTAGGCC12.30519e-06
AAGCACGGTTCCACGCTCCCACGGTTCTGCTGTGTTCTCC12.30519e-06
AAGCACGTAGCTGTGGAATAATCACGGTATTAGGGGGGTA12.30519e-06
AAGCACGTATGTTCGGGGTGTAACGAATCGCCCATTCACT12.30519e-06
AAGCACGTTAGTGGAATTGTCGCCCACCCGATTGACGGCG12.30519e-06
AAGCACGTTCTTATGCGTGTCAACTTCACAGCGTGGAGAT12.30519e-06
AAGCACTGATAACGTAATTATTCCACGGGAGAGCGTGGGC12.30519e-06
AAGCACTGGATGGGCGGCCCACGGGCGCCGTGCACGAAGG12.30519e-06
AAGCACTGGCGGGGTGTACCCACGTCTGCAATGGCCCTGC12.30519e-06
AAGCACTTTGCGTAATCGGGTGCGTGGGGTGATGTGTAAC12.30519e-06
AAGCAGAACCGTCGGTCGTCCGTGGAATACGCCTACATGG12.30519e-06
AAGCAGAACGACGTGGAAAGCGTGGGTCGAGTGGGGATTG12.30519e-06
AAGCAGAGCACGCGTGGTTTCGACCGCGTCACGCAGGTCA12.30519e-06
AAGCAGCACTATCGAAGCGTGATCGTGGACGTGTTTGTGG12.30519e-06
AAGCAGCCGAGTGGGAGATGATCGTGGAAGTTTCCCAGTT12.30519e-06

Read fractions use all reads in this source file as the denominator.