P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCCGCTTGGGCCTCGTGGCCGGAGGATGTTGTTCCACG12.30519e-06
AAGCCGGAGTGGGGATGCAGGTCGTGCCGAGCGTGAGAGA12.30519e-06
AAGCCGGCGTGGCACTGTGGGTGGGTGTGTGGGAGCCGAA12.30519e-06
AAGCCGGGAGTGCCGTTCGTGTCGAGGCTCATCGGCTGTC12.30519e-06
AAGCCGGGATCCACGCGAACTTCATACTCGTCGGAGTTCC12.30519e-06
AAGCCGGGGTGGGTGAAGGCGAAAGTTCCACGCGGGGTAG12.30519e-06
AAGCCGGGTCGGGACTCACGTGGGGTTGATCGTGGGGCCA12.30519e-06
AAGCCGGTAAGTCGTGGGGCGTGGGGTAGAACAGGCGTGG12.30519e-06
AAGCCGGTCGGGGTGTGAGGGCCCGGCCCACGCGTGTAGG12.30519e-06
AAGCCGGTCGTGGACATGGATAACGTGTTTGCGTGGCGTG12.30519e-06
AAGCCGGTGGCGTGATGTGGAGCCACGTGGTTCGGTAGTG12.30519e-06
AAGCCGGTGTACCGAGGAGCGTGGACCGAGTGGATAGGGT12.30519e-06
AAGCCGGTGTGCGTGGATATCTGTACGGTGCCCACGCGTG12.30519e-06
AAGCCGGTTCACGCGGGTGGGTAATTGTATGAGCCTAACG12.30519e-06
AAGCCGGTTTCACGTGGATGTGCGTAGTGGGGGCTTGTGT12.30519e-06
AAGCCGTAATACTGGGCGTGGAATACGCAAGCATAGTGAA12.30519e-06
AAGCCGTAGGGTCATCCGGAGTCATCTTGGGGCGTCGTTT12.30519e-06
AAGCCGTATGCGTGGAAGGACCTTTTCAGTTGTGGAATGC12.30519e-06
AAGCCGTCACGGCACTCGTGGGGCCGTAGACGTGGACAGG12.30519e-06
AAGCCGTCCTCGTCACACTGTGGAATTGCTGTCTCCCACG12.30519e-06
AAGCCGTCTACTGTGTCACCCGTGTTGACATTCAAATGCG12.30519e-06
AAGCCGTGACGCACATGAACCACGATCTTGGATCGCGTGC12.30519e-06
AAGCCGTGAGTTCATTGACAGTTTGTTGATGGAATCCACG12.30519e-06
AAGCCGTGGCTATTTGTGGATGCGCAAGACATGTAGTGGG12.30519e-06
AAGCCGTGGGGCGTCGTGGGTTGCGTTATCGGAAGTGGAA12.30519e-06

Read fractions use all reads in this source file as the denominator.