P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCGAACGTTGTCGTGGGAACAATGCTGTGGAGTGGGTC12.30519e-06
AAGCGAAGAGGGGCAGCATCTCCCACGCAGGAGGGGCGGT12.30519e-06
AAGCGAAGCGTGGATCCCTTATATGAATCACTAATGGTCA12.30519e-06
AAGCGACAACGCCACGCGGTATCGAAAGGCGCGTGGACTG12.30519e-06
AAGCGACACTGTAGCTCGCCTAGACGTGACGTGGGAAGGC12.30519e-06
AAGCGACCGCACAGTCACGGGTGGGTAGTGGAGGTGGACA12.30519e-06
AAGCGACCGTGGCCCCCAATTATGGGTCCGTGAGTGGGTG12.30519e-06
AAGCGACGCGGGGCCCACCGGGTGTTGGCGTGTCGTGGGC12.30519e-06
AAGCGACGTTTGCCGTGGATGCGGGTGGCGTGGCGTGGAC12.30519e-06
AAGCGACTCGCCACGCGGCATGTTTTGCGTGGGCCCGGTA12.30519e-06
AAGCGACTTGGACTGGGTATGTCACGAGTGGACGGGGTGC12.30519e-06
AAGCGAGGGCACCAGCTTGGACATCGTGGATGCGCCGTGG12.30519e-06
AAGCGATACGGGAAGGTACACGCGTGGACGTCGTGGATGT12.30519e-06
AAGCGATCGCGTGGGTAACAACATCGCGTCTGGCCGTGGG12.30519e-06
AAGCGATGCCACGAAATGATCGTGAAGTACGATGTCCACG12.30519e-06
AAGCGATGCTTCTCGCGAGAACGGTGAGGATCGGACCGTC12.30519e-06
AAGCGATGTCGTGGGCAGGACCATGTTCGTGGAGTGGGTG12.30519e-06
AAGCGATGTGGGATCGACGCGTGTGACTAGTTCCACGCGG12.30519e-06
AAGCGCAACACGAGTTGCCACGCATTACAGTGCAGCGTGA12.30519e-06
AAGCGCACGCGTGGGGGTGGACCATGTGGGCGTCGTGGAC12.30519e-06
AAGCGCAGCGTGGGGGCGACGGCGTGTAAGTGTTCAACGA12.30519e-06
AAGCGCAGTATGTCGGTTCCCCACGGCCCAGTGGGTTCGG12.30519e-06
AAGCGCCGGTACGCGTGGACGATCCTGTTGTCTGTGGGTA12.30519e-06
AAGCGCCGTGGGGGGCGACAGCGTGGAAAACACTGGGAGA12.30519e-06
AAGCGCCGTGGTCGGACGTTACGCTGCCACGCGGCCCACG12.30519e-06

Read fractions use all reads in this source file as the denominator.