P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCGTGGGAGGCGCGTGGCTGTGACACGAGGGGGCATGT12.30519e-06
AAGCGTGGGAGTACCCACGTGGATGTGTCGGGATCGGGAG12.30519e-06
AAGCGTGGGATCAAGGTCGCCCACGTGCTTAGTAATGTGA12.30519e-06
AAGCGTGGGATGCGTCGGTGTACCGTGGGTCGTAGTGGGT12.30519e-06
AAGCGTGGGATGGAGGAGGGTGTCACGCGTGACTTAACCA12.30519e-06
AAGCGTGGGCAAACCGGGGGAGATGAGATGAGCGGAGGGG12.30519e-06
AAGCGTGGGCCTTACCGGCGTGGGATGCGAGGGGTCTACC12.30519e-06
AAGCGTGGGCGTTTCACGGGGGTTGACGTGAAGTCAATAA12.30519e-06
AAGCGTGGGGACTGGAACCAGGCGTGGATAGGCGGGACGA12.30519e-06
AAGCGTGGGGAGTGTGGGTGTGGACTCTCACGATATTCGT12.30519e-06
AAGCGTGGGGATTGCAAGGCCTGTATGGACACGCGTGGCC12.30519e-06
AAGCGTGGGGCAAGGTGCGGGTGGATTGCGTGGGGCAACG12.30519e-06
AAGCGTGGGGCGAAAGTGTGGATGTCGTGGCGCCTCGTGC12.30519e-06
AAGCGTGGGGCGATGGCTACACTCCCGGTCGTCGCAAAGT12.30519e-06
AAGCGTGGGGCGCATATGAATTAAGGGTGTCCGTGGAGTG12.30519e-06
AAGCGTGGGGCTGCACGATCCACGCAAGGAGGTCAGGTGG12.30519e-06
AAGCGTGGGGGAGGACGCTGTAAGGGTAACGCGCGTGACC12.30519e-06
AAGCGTGGGGGGCGTCGCGTCTTGCGCGTGGAGTTACGGC12.30519e-06
AAGCGTGGGGGGTAGTGGAGGGATCGACGTGGGTCCTCTG12.30519e-06
AAGCGTGGGGGTTCGAGCTTGGAGACACGGACGTGGATCT12.30519e-06
AAGCGTGGGTAAGAACTTAGCTGAGATTGCATGGGGGTGG12.30519e-06
AAGCGTGGGTAATGGATGTGTTTCGGCCGTGGGTGGGTGA12.30519e-06
AAGCGTGGGTACGCCCTCCCGTTTTCAGTCAGGTAGAGTT12.30519e-06
AAGCGTGGGTAGGGTAGGTGACGCGCGCGACGCGTGGGCG12.30519e-06
AAGCGTGGGTATTGGTGTCGACAGCGGGTGTTCTTCGCCC12.30519e-06

Read fractions use all reads in this source file as the denominator.