P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGAAGGGGGGCGGAACGTCACGTCACGCGTGGGCTGGA12.30519e-06
AAGGAAGGGTCATCCGTGGGGCTGCACGTGTCAATGGACG12.30519e-06
AAGGAAGGGTGATATCCACAAACACGACGTGCCACGATCA12.30519e-06
AAGGAAGGTAAGTGTGCGTGATCGTGGGGAGGTGGGAGGA12.30519e-06
AAGGAAGGTACATTGGAGCTGTCTGATTCGTTCGTCCACG12.30519e-06
AAGGAAGGTGGGTGGGGCCACGTTAAGTGGGGACGTTCCA12.30519e-06
AAGGAAGTCACGGTGGTGGCTTGTTCACGTGGTAGCGTTG12.30519e-06
AAGGAAGTGAGAGCGTCCGTGGACAAGCTCGTGGGCACGG12.30519e-06
AAGGAAGTGCTGGTGGAGTGGCCAGCGTGGCGAGTCGTGT24.61038e-06
AAGGAATCACGGGAGAACGTGGGGGCGTGGGTGCGTGTAA12.30519e-06
AAGGAATCACGGGATCGTGGCCTGTACTTGGGGCCGTTGG12.30519e-06
AAGGAATCGATTGAGGTTTTAGATTTAGTTGGTGTGGGTG12.30519e-06
AAGGAATCTGAACTGCAGCGACACGCGTGGGTGCGCCGTG12.30519e-06
AAGGAATCTGGTGGGCGGTTCCCGTGGTGGCGGGATGCTG12.30519e-06
AAGGAATGAGCGGGATCGTCGGATGTGTCGTGCGTGCACA12.30519e-06
AAGGAATGTTCTCGTGGAGGAGCCGCTAAACGTGGCATTC12.30519e-06
AAGGAATTCACGAACGTGGGCTCATAGGTGTTGCTGAGTT12.30519e-06
AAGGAATTCCACTACTCACGTGGAAAGTCCAAGGGAACCT12.30519e-06
AAGGAATTCCTTCGTGGGATCGGACGTGTGGCCTTGGGTT12.30519e-06
AAGGAATTCGGACGAGTCGTGTGTCACGCAAGGATCCACG12.30519e-06
AAGGAATTTTATCACGCATATTCAGCGAAGGAAGCACGGA12.30519e-06
AAGGACAAGTCCACGGCGTATCACGCGTCAATATGTTTGC12.30519e-06
AAGGACACACGCCGCTGCCGCGTTTAAGTGTGGCGGGATG12.30519e-06
AAGGACACGAGGGCCGGCGAGTGCCACGGAGAGATGCCAC12.30519e-06
AAGGACACGCGTGAGGTCAGACGTTGCGTGGTAAGTCCGA12.30519e-06

Read fractions use all reads in this source file as the denominator.