P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAATCTGTCAGATGTCACGCGTGGACATCAGATTAATC12.30519e-06
AAAAATCTTGCGTGTGTTTACGTGGGTTTTTTGGAGTGGG12.30519e-06
AAAAATGACAGTACGCGTGGCACTGAGAGGGGGGCTTGTG12.30519e-06
AAAAATGAGTGCGTGGGCGTGCGTGACGTGGAGTAGTGGA12.30519e-06
AAAAATGCGTGGGCTAGTTCGGCACTTCAGCGCGAGGGAT12.30519e-06
AAAAATGTCTGAAGCACGTCACGGGAGACACGCTTTTCCA12.30519e-06
AAAAATTAACGTGGAACAGCGCGTGGATTCTAGTGATATG12.30519e-06
AAAAATTCCGCGGTAATGGCTCGTGGGTGTGAACGGGGAT12.30519e-06
AAAAATTGCTTGGTAGTCCCTGGTCAGTGGCGCAGCGTGA12.30519e-06
AAAACAAAATTGCTCGGTCACGCTCGAATATGCGTGGAAA12.30519e-06
AAAACAATCACGCGTGACATCTTGGGTCATGTGCGTGGTT12.30519e-06
AAAACACACGGAGTTTTCGGCCGTGGGGCTTGCTGAACGT12.30519e-06
AAAACACATCTGTGGGGGATCGTGTAGGCAAAGTTCCACG12.30519e-06
AAAACACGAACTTCACGTGTTCGCGTGGGTAATCGCATCT12.30519e-06
AAAACACGAGAAGTCATCGACTCGGCCGTGAGATCGGAAA12.30519e-06
AAAACACGAGAGTGGATCTAACCGGGGTGGGCTGTTAGGC12.30519e-06
AAAACACGCACCATCATGCGTGGGGCCGTGGACCGATCGT12.30519e-06
AAAACACGCGAGGGTGCCTGTGCGTGGGTTGGACGGGTAC12.30519e-06
AAAACACGCGCGGGTGTCGGGTGGGGTTCGATTCAGTGGA12.30519e-06
AAAACACGCGGCACGCAGCGTGGGGGAAGGCCCAGTGGGG12.30519e-06
AAAACACGCGGCATGGGCGTGCGGTGCGAGAGCGTGGGGG12.30519e-06
AAAACACGCGTGAGCGTTAGTGGTCTTGGTTGCGTGGGGT12.30519e-06
AAAACACGCGTGATAATTCACTGGACAAGACGGGATTGAA12.30519e-06
AAAACACGCGTGGGTCGTTCTTGCGGTCGAGTGGCGTGGG12.30519e-06
AAAACACGCGTGTATCTGCGTGTATGAATTGATTTCGTGT12.30519e-06

Read fractions use all reads in this source file as the denominator.