P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGATTTCGCGGGGCGTGACAATAGTGGGGAGGCACACG12.30519e-06
AAAGATTTGTCGGGGCGCGTGGGTGGTGTCGGCTGTGATG12.30519e-06
AAAGCAACACGCGTGTTTTACTCACGTCTAATCCTACCGA12.30519e-06
AAAGCAACGGATGCCACTCCCCGCGTGGAACTGGAATCTG12.30519e-06
AAAGCAAGGGACGTGGCGTGGGCTGTAATGATCGTGGGGG12.30519e-06
AAAGCACCTCACGGGGCACCCGCTAGTGGACATGAGGTTA12.30519e-06
AAAGCACGCGCGGCGTGGGCCGACATAGGCTCTAAGCCCA12.30519e-06
AAAGCACGGTGCGTGGATATAGTGTCACCGTGGTGGGGGA12.30519e-06
AAAGCACGTGGGGTGCCATCCATGTGTATGTCGCGTGGAC12.30519e-06
AAAGCAGAAGGATCTATGTAACCCACTCAGATCACGCGCG12.30519e-06
AAAGCAGACCACGCGTGGGAGTCTGGTGAGAACGGGTCAG12.30519e-06
AAAGCAGGGCGGATGCGTGGGGGGGGTAAGACGAGGGAGT12.30519e-06
AAAGCAGGTCCACGGGTGGGGTCTGAGCGTAATGGGCGGG12.30519e-06
AAAGCATAGACGCGATGCTCAGTGCGCCACGCGTGTAATG12.30519e-06
AAAGCATAGGTCGTGACGTGTTGACGGCGCGCGTGGGGGT12.30519e-06
AAAGCATGTCCACGGAGGGAAGTAAGCATTGTGTCCGTGG12.30519e-06
AAAGCATGTGCGTGGGTGGATGCGGGGAGTTAAGAGCTGA12.30519e-06
AAAGCATGTGGGCCTTCGGGGCTACCAACTTCCACGCATG12.30519e-06
AAAGCATTGCAGTGGATCAGTCGCGTGGGTTCGTGGGTTA12.30519e-06
AAAGCCACGCGCGTGTCCTGGATGTGCGCGGGATCACGTT12.30519e-06
AAAGCCACGGGGATGCACCTTCCGAGGTGCCGTGGAATAT12.30519e-06
AAAGCCACGGTGTCTAATGCCGATTTAGAGGGCGCTAAGT12.30519e-06
AAAGCCCACTAGGGGAGTATTGTGGACGATAGTGGGATGT12.30519e-06
AAAGCCCCACCTAGTGGAATGAGCGAGTTATCTACGGCGA12.30519e-06
AAAGCCCGGTGGCGTGCGTGGCTGTCTCGCGTGGGCTGGG12.30519e-06

Read fractions use all reads in this source file as the denominator.