P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGCGGGTGGATCACGTGGATCGCGTGCCAGGTGCGTGT12.30519e-06
AAAGCGTAGACGTGATTCCGTGACGTGCGTAGTGCCCACG12.30519e-06
AAAGCGTAGTTTAGGAACTCGTGGGCCCGCGGGAATGTAG12.30519e-06
AAAGCGTCCGGGACAACGTTCGTGGGCTGTCGCCACGTGG12.30519e-06
AAAGCGTCTTCAACACGCGTGCGCCGAGGTCAGGCGTGGA12.30519e-06
AAAGCGTGATCGTGGGGGGACGAACGCACGCGCGATAGAG12.30519e-06
AAAGCGTGGAATGGCATATGTGGACACGTGCGTGGCGTTG12.30519e-06
AAAGCGTGGAGTGATGAATGGCGCGTGGGTGACCCGCCAC12.30519e-06
AAAGCGTGGGACTGGGTAAGTAGCACGCCGTAACTTTTGA12.30519e-06
AAAGCGTGGGATTCGCGGTTGTCACGGGTGGGGGCAATCG12.30519e-06
AAAGCGTGGGCTGTGGGCGCGTCGCGCGTGGGCCAGAGTT12.30519e-06
AAAGCGTGGGGGGTTGTTAGCTAGTGGGTAGAGTATGGTT12.30519e-06
AAAGCGTGGGGGTTCGCGTGGGATCGTTCTAAGTGGCACT12.30519e-06
AAAGCGTGGGGTTGTCTTGCAACGTGGGGCGGGGAAAGCC12.30519e-06
AAAGCGTGGGTTCCCACGTTGGTTCACGTGGGCCACCCGC12.30519e-06
AAAGCTACCACCTAGCATGCTAATTGGAGTCTAAGGGCGG12.30519e-06
AAAGCTACGGTGCTTCAAAAAGCCGTGTCGAGGGTGCTGC12.30519e-06
AAAGCTAGCGAGAAGCGGTGCGACTCCGTGGGGTGCGTGT12.30519e-06
AAAGCTATGTGTTCTAGTGTCCACGCACATGCCACTGGAC12.30519e-06
AAAGCTCACGATCGCAGTGGACGAAAGCGTGCTGTCTGAG12.30519e-06
AAAGCTCAGGGCGTGGGGAAAAGTAGCGAGGTGGTGCAAT12.30519e-06
AAAGCTCATTCCACCGTGGAACAGCGTGGGACGAGAGATG12.30519e-06
AAAGCTCCACGGGGCGTGACGTAGATAGTGGATATCGGTG12.30519e-06
AAAGCTCTCGTGGGCGGGCAACTTGCGCGTGGGACTCACT12.30519e-06
AAAGCTCTGCGTGGACGTCGTGGAATAGGGTGTGGAATGA12.30519e-06

Read fractions use all reads in this source file as the denominator.