P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTAGCTTCGCGTGGACACTATTGGTGGGGCACACACG12.30519e-06
AAAGTAGTCGTTGGGTGGTGCGAAGCCACGTGGATATAGG12.30519e-06
AAAGTAGTGTCTGGGTTCTAATTGCGTGGGTGGACGCCCG12.30519e-06
AAAGTAGTTCACATGGGAAAGCGTGCGTGCGTGGGACGTC12.30519e-06
AAAGTAGTTCTCGCGTGGGCCGGGTGTGGATTGAGGCCTC12.30519e-06
AAAGTATATGAGCAGCCACGCGCCGTTTTAGCGTGGATAT12.30519e-06
AAAGTATCACGTCTGGGCGGTGTAGCGTGGGTGTGGCTCG12.30519e-06
AAAGTATCATTGTGGTGGGCTAGCGTGCTCCCGGGTAGTG12.30519e-06
AAAGTATCGCTCGTGGATTTCCCCGGGCAACCGTGCGGGA12.30519e-06
AAAGTATTGGCGGCGTGCTGCCTCTCGTGGAAAAATGTGG12.30519e-06
AAAGTCACACTTGCGTTTACACTCGTGGAAGTGGTGGTGA12.30519e-06
AAAGTCACGCGCGTAGTTATCGCGGTTTTCTGGGTTCCTG12.30519e-06
AAAGTCACGCGGCGTGGGGCGCCTGTTCAGACGGTTAAGC12.30519e-06
AAAGTCACGCGTGGTACTGTGTCGCATGAGGGGGAGAGAT12.30519e-06
AAAGTCACGGGACCGTCCACGAAAAGTCGCGCAAGTGTGA12.30519e-06
AAAGTCATGTCTAGGGTCGAAGTTGGCGTGGACTCGTGTG12.30519e-06
AAAGTCCACGCATGGAATACAACACGGGGGTATGTTTTCG12.30519e-06
AAAGTCCCAACGCGTGCGTGGAAATTCCAGGGTGGTCGGT12.30519e-06
AAAGTCCCTTTTTAGTGACGTTGCGTGGGTAGGCCGAGCT12.30519e-06
AAAGTCCGTCCACTGTGACATTGGCCCACGTGGGTTCGCG12.30519e-06
AAAGTCCTGGTCACGTACGTGGCGTCAGTGTGGACGTGTG12.30519e-06
AAAGTCGAGAGTTTGAACACTCACGTGGGCATGTAAGCAA12.30519e-06
AAAGTCGATTAGTGACAGACAGAGTTTTCGGACGTGGGGG12.30519e-06
AAAGTCGCCACGGACACCCACGCCTGCGCGTTTTCTAGTT12.30519e-06
AAAGTCGCGTGGGTGCGCCTCGGCAACACCTCAAGCCTTG12.30519e-06

Read fractions use all reads in this source file as the denominator.