These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATGCAGGGCGTTCGCTGTAAGGGGATACCACGTGTGTG | 1 | 4.68367e-06 |
| AAATGCATATGTGCCAATGGTTGAGGTCGGGTTAGTCCAT | 1 | 4.68367e-06 |
| AAATGCATGGCTTAAATCACGGGTGTTTTGCGTGATATAG | 1 | 4.68367e-06 |
| AAATGCCACGGGCAGTGGGAGGTAGCGTACGGGTGGATCT | 1 | 4.68367e-06 |
| AAATGCCCACGCGTCGTGGGTGAGCGCGGTTGACCAGGGT | 1 | 4.68367e-06 |
| AAATGCCCGTAGATATGATTCGGGTTCCCCATGTCTGGTA | 1 | 4.68367e-06 |
| AAATGCCGCCCACGCGTGCGCGTTGAGGATCGATATATCG | 1 | 4.68367e-06 |
| AAATGCCGTTGTGGGTCTTACGTGGGTTAGTGCAAGGTGA | 1 | 4.68367e-06 |
| AAATGCCTACCACGTGTGGACAGGTAGTGGGTGTTTGTGG | 1 | 4.68367e-06 |
| AAATGCGCAACTGTCAGTGGGCAGTTGTGGGGGTGGCGAA | 1 | 4.68367e-06 |
| AAATGCGCGAGTTCGCAATATCGCGTGCCAGGGGCGACTC | 1 | 4.68367e-06 |
| AAATGCGCTTCGATTCGTGGAGTTTTGTCGGCGCGTGATA | 1 | 4.68367e-06 |
| AAATGCGGGCGATTGGGTGGAGATGGTAGAGGGGGGAGAT | 1 | 4.68367e-06 |
| AAATGCGGTGGGCGTCGAGTGGGATGTTAGGGAGACTGCT | 1 | 4.68367e-06 |
| AAATGCGTCCGTGGATTACGGCTCCTTTTATAGGGCCGCT | 1 | 4.68367e-06 |
| AAATGCGTGATGCCAGCTAGCGCATAGAGCCAGTTCCACG | 1 | 4.68367e-06 |
| AAATGCGTGCGGGACGCTTATGCTGGCCTTTTGGCGTAGA | 1 | 4.68367e-06 |
| AAATGCGTGGACGTGCGTGCGGAGGTGTACACTATGCGTG | 1 | 4.68367e-06 |
| AAATGCGTGGAGAGACGGGGCTGGGAGGCAGTGGAATGTC | 1 | 4.68367e-06 |
| AAATGCGTGGATTCACGTAATGTTAGGTGGTTCGGAGGAT | 1 | 4.68367e-06 |
| AAATGCGTGTCCGTCACCCGGGCGGGGTTGCACGTGGCCA | 1 | 4.68367e-06 |
| AAATGCGTGTTAGACGTGTATGGTTGGGACCTATCCCTAG | 1 | 4.68367e-06 |
| AAATGCTAGTCCCGCTACCAAGTTCCGTAAACTGTTTTCT | 1 | 4.68367e-06 |
| AAATGCTCAACGGGGACACAGGCCACCTGATGGGCTTGGC | 1 | 4.68367e-06 |
| AAATGCTCGGATTGCGTGGAAATATGCTCTAAGGGTCGCT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.