These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACACTCCGACAGGCTCGTGGGCGCGGCCAACCACGTGAC | 1 | 4.68367e-06 |
| AACACTCCGCGTGACGTGGATTGGGTAGCAGTGACGCGCG | 1 | 4.68367e-06 |
| AACACTCGATCGAGTCGTGGGATGCGACAACGGCTCTTCA | 1 | 4.68367e-06 |
| AACACTCGTGGCATCATGGAGGGTGCATTGTTTTGTAAGT | 1 | 4.68367e-06 |
| AACACTGATGGTCCCGATAGTCGGACACGCGAGTGGACCT | 1 | 4.68367e-06 |
| AACACTGCGTGGGTGGCAGTGAGTGGGTGGGTGGGAATGA | 1 | 4.68367e-06 |
| AACACTGCTACGTGCTGTGGCTGTGGGTGACGGACACTTT | 1 | 4.68367e-06 |
| AACACTGCTTTTTTATTGTCACGGTGTTTTGACGATGTCA | 1 | 4.68367e-06 |
| AACACTGGCGTGGGGTCCCCTTCACTGATAAACCACGTAC | 1 | 4.68367e-06 |
| AACACTTATATGGTCCCCCCGAGCTGTGCATGCACTTGGT | 1 | 4.68367e-06 |
| AACACTTCCTTAGATTCCACTGCCACGTGCTGGATATCCA | 1 | 4.68367e-06 |
| AACACTTCTCCGAGCGTGGAGACACGTTGCGGTTGCAGTG | 1 | 4.68367e-06 |
| AACACTTGAGAAGCAAACGTACTTTCCTCCTGTTGAAGCT | 1 | 4.68367e-06 |
| AACAGACAGTGTCAGGATCGTGGCCACGGCGGATTAGGTT | 1 | 4.68367e-06 |
| AACAGACCCGCGTGGCAGTCGGGGAAAATGGGGTTGCGTA | 1 | 4.68367e-06 |
| AACAGAGAAATCCCACACTGCGTGGAGGGTATGTTACGCA | 1 | 4.68367e-06 |
| AACAGAGCATACACACCGTGTCCACGCGTGGAGGACCAGG | 1 | 4.68367e-06 |
| AACAGAGCGTCACGGGAAGGGTGGACAGGGGTTGATGTAC | 1 | 4.68367e-06 |
| AACAGAGGATATCCGCGTGGGGTACGGTAGTGAGGTTCTG | 1 | 4.68367e-06 |
| AACAGAGGCGCGTGGGTCTGTGATCGTGCGTGGGTCTTGG | 1 | 4.68367e-06 |
| AACAGAGTGGAAGGGCTGTTTTCGCTCAAGACGTGGGGTG | 1 | 4.68367e-06 |
| AACAGAGTGGAGCGGCGCGGAGTCGTGGTGGGAGGTGGGC | 1 | 4.68367e-06 |
| AACAGAGTGGGTTCGTGATGAGCGGCGTGATGTCAGGGTA | 1 | 4.68367e-06 |
| AACAGAGTTTGAGGTGTAAGCGGCTAGATGTTGTGCGCAA | 1 | 4.68367e-06 |
| AACAGATCCAAGGTCCTATCGTGGCAGTGTTATAACATAC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.