These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGACATAGCTCGTCGGTCCTGCTTGGGCACGCAGAATT | 1 | 4.68367e-06 |
| AACGACATGGCGTCATAGTTGTCGCCAGTACCGTTCGGCG | 1 | 4.68367e-06 |
| AACGACCACGCAGGGGACACGGGAATGAGATTGTGAGTGA | 1 | 4.68367e-06 |
| AACGACCGAGGGGACTCTCCGGCGGGGGGATGATGCTTGC | 1 | 4.68367e-06 |
| AACGACCGCGGTACGAGCTTCAACTAATGGACGCTCTCCC | 1 | 4.68367e-06 |
| AACGACCGGCCGAGGAGGAGTGGGGTGCGTGGGGTGTCCA | 1 | 4.68367e-06 |
| AACGACGATGAACAGGTAGTGACGTTGATTTACCGGTCAC | 1 | 4.68367e-06 |
| AACGACGCGCGAGGAAGTAAATTCATGACCTCGTGGGTGC | 1 | 4.68367e-06 |
| AACGACGCTGGAGGGCCTTCCCGACCTGTGAATACGATCT | 1 | 4.68367e-06 |
| AACGACGTTGGGGTTATAAGAGTGCGTGTCCGCAGTCACA | 1 | 4.68367e-06 |
| AACGACTTGAGTTGGGTAGCGTGACTGGAGGCGTGGGGTC | 1 | 4.68367e-06 |
| AACGAGATGCCGGCCACGCGTGGAAGGCCTAGAGGTAAAT | 1 | 4.68367e-06 |
| AACGAGATTCGATGTGGAACGTGGGAGAATCGGGGGAGAT | 1 | 4.68367e-06 |
| AACGAGCCACAGATGGCTGGCGTGGAATGAGGGTTTGAGA | 1 | 4.68367e-06 |
| AACGAGCTAGTAATCTGTGTTTTTAGGTTGACACAGTGGA | 1 | 4.68367e-06 |
| AACGAGCTAGTGTGCACAAACGAGAGGTTGCAGACGTGCG | 1 | 4.68367e-06 |
| AACGAGCTGCGACTGTATGCTTCTGTGTGTAAGACGTGAA | 1 | 4.68367e-06 |
| AACGAGGAATGAGTGGAGTGCTAAAGTCGGGGAAAGACGA | 1 | 4.68367e-06 |
| AACGAGGAATTGAGGACATGGGTCAGCGGCGTTGTAAGTC | 1 | 4.68367e-06 |
| AACGAGGGCCTACGTGGATTAGGCGATGTATGGGCGCGGA | 1 | 4.68367e-06 |
| AACGAGGGTTCAGCGGGGGCGTGTGGTGGCGGATTTCTCT | 1 | 4.68367e-06 |
| AACGAGTAGTGGACATAGACTGGACATCCACGCCGGTGTC | 1 | 4.68367e-06 |
| AACGAGTCCACACGCCCCGTGTGCAGTACGAGCGCCCACG | 1 | 4.68367e-06 |
| AACGAGTGAAGGGTAGCGTGGGAATTACTCGCGGAAGCTG | 1 | 4.68367e-06 |
| AACGAGTGTTTCACGTGGGGAGGCATGATCGTTGGTGGTA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.