These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGGGAGTGGTTTCTCGCGACCGGGCGCGTGGGAGGGCC | 1 | 4.68367e-06 |
| AACGGGCCCTTGAGGGTGGGTCGGACGTTATGTAGGTGGA | 1 | 4.68367e-06 |
| AACGGGCCGGTGTGGAGCCTGCAGTGCAATTGGATAAGTG | 1 | 4.68367e-06 |
| AACGGGCGAGAGCTTAGGCTGATTGTAGCGGTGGGGCCAG | 1 | 4.68367e-06 |
| AACGGGCGAGGGGGATTGATTCTTGTCGTGGTGTAGGCCG | 1 | 4.68367e-06 |
| AACGGGCGATGCTCGGATGCGTGATCTGCGTGGGTCCCAT | 1 | 4.68367e-06 |
| AACGGGCGCGGCGTGGCCCGCGGACGGGCGTGGCAGTGGA | 1 | 4.68367e-06 |
| AACGGGCGGTTCTCGTGGGGGAAACTCGGCGTGGTCGGGA | 1 | 4.68367e-06 |
| AACGGGGAAAGGAGGAGCAATCATCTAACTATTTGTTCTG | 1 | 4.68367e-06 |
| AACGGGGAAGCGTGAGGTTTGCGAGTGGAGTGTATATTAA | 1 | 4.68367e-06 |
| AACGGGGAGAGGCTGAAGACTTGTCCTCGTGGGTATTTCG | 1 | 4.68367e-06 |
| AACGGGGAGCGCAGCAAAACCGCGATGTCAGTGTTGGGGA | 1 | 4.68367e-06 |
| AACGGGGAGTATCCACGTCCCGTGGCGAATGAAGGTGAGA | 1 | 4.68367e-06 |
| AACGGGGCCCAAACGACCTGTCTCGCGTGGGGTCGCGTGG | 1 | 4.68367e-06 |
| AACGGGGCGAGCGCTTTACGTCACCGTGGGTGTACGTGGG | 2 | 9.36733e-06 |
| AACGGGGCGCACGTCGTGGGGAGTTTCAATTGTGTCATGC | 1 | 4.68367e-06 |
| AACGGGGCGGGGGTGTAAGGACAAATAGGAGGGACCTCCG | 1 | 4.68367e-06 |
| AACGGGGCGTTTCACGCGGTTCACGTGGTGGAATGGGTGG | 1 | 4.68367e-06 |
| AACGGGGGCGGCGTGGGGACATCGACGATCGAGTGGGCGT | 1 | 4.68367e-06 |
| AACGGGGGGCCGTGGTGGAGAGGCCGTGTTGGTCGTGGGT | 1 | 4.68367e-06 |
| AACGGGGGGGCGTGGGTTGATGTCGCGGATTTGTCGGCGA | 1 | 4.68367e-06 |
| AACGGGGGGGGGTTAGGATGTTAGGGTGGCGGTGGAGTGG | 1 | 4.68367e-06 |
| AACGGGGGGTCAGATGGCCCGTCTGCCGAGCACGCCCACG | 1 | 4.68367e-06 |
| AACGGGGGGTGTTGGATACACGAGTTTGGAAGGGACTACG | 1 | 4.68367e-06 |
| AACGGGGGTGCGTAGTGTGCTAGCCTGTACTCGCGTGGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.