These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGAGCGGATCGTTGAGTATCTCCGGCGTGATTATCCTAT | 1 | 4.68367e-06 |
| AAGAGCGGGATCGTGGATGGTAGGGTGGATGATCGTGATG | 1 | 4.68367e-06 |
| AAGAGCGGTCGGTAGGCTGCGCGCTCAACGGGCCCGCCCT | 1 | 4.68367e-06 |
| AAGAGCGTGGAATATGAAAAGGGCGCGCGCAACCGTGGCG | 1 | 4.68367e-06 |
| AAGAGCGTGGGCTCGTCGCGGAGGGCATGTTACGGATTCT | 1 | 4.68367e-06 |
| AAGAGCGTGGGTCAGGCCGTGGATAGGAGCGCCGTGGCTA | 1 | 4.68367e-06 |
| AAGAGCTACTCCTGGACCACGGGTCCAACGTAATGTGTAA | 1 | 4.68367e-06 |
| AAGAGCTCGGCCCGGAGTTAGGCTTCGCGAGTTCGTGCGA | 1 | 4.68367e-06 |
| AAGAGCTCTCACGCGTGGGCTCGGGCGCCAAGCGGCGTGG | 1 | 4.68367e-06 |
| AAGAGCTGGATTTAGGTGGGTGCCTCGTGGGTTAGGCGCC | 1 | 4.68367e-06 |
| AAGAGCTTGGGCTGTGGATTACGTGTTTCCACGCGTCTGC | 1 | 4.68367e-06 |
| AAGAGGAATCTCTTTGCGATGTAAACAGAGTGCGGGTGGT | 1 | 4.68367e-06 |
| AAGAGGACGAACATTCTCAACAGTTCCACGCAAGTTCTCC | 1 | 4.68367e-06 |
| AAGAGGACGTGGCACGGATAGCCCACTGATAACGTGACGT | 1 | 4.68367e-06 |
| AAGAGGACTCAGTGGGAATGTTCCACTGGGTGTGGGTTGT | 1 | 4.68367e-06 |
| AAGAGGATCGCGTGGCAAAGTCCCGGTGGCCTTGCCCACT | 1 | 4.68367e-06 |
| AAGAGGCCGAAACCCTTACGTGTGAGACCTTATGGTGTCG | 1 | 4.68367e-06 |
| AAGAGGCCTTCGTGGACAAAGCCGGTTGAATAGCCACAAT | 1 | 4.68367e-06 |
| AAGAGGCGGCCACGTGGACATCTGTGGGCGTGCGAGTTTA | 1 | 4.68367e-06 |
| AAGAGGCGTGCAGTGCGTTACCGATATAGAATCTGCAGTT | 1 | 4.68367e-06 |
| AAGAGGCGTGGGTAGGGCTTGAGGACATGTCGGTGGACGA | 1 | 4.68367e-06 |
| AAGAGGCTTCGTTGAGGATGCCTTTCTTGCGTGGGAGTTA | 1 | 4.68367e-06 |
| AAGAGGGACTCGTGCCTTTGTTGGACCTCCCAGTCAGCCC | 1 | 4.68367e-06 |
| AAGAGGGACTGGCGCTATGATTATAGAGCAGAAGTGGACG | 1 | 4.68367e-06 |
| AAGAGGGACTTTTACCCTCCGTGATTCCACTGATGAAGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.