These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAACACGTTAGGCGAAGAGTGGGTGTCGTCGCGTGCAGCA | 1 | 4.68367e-06 |
| AAACACTGGAAGCGTGGAGGGCGTCACGAAGTACTTGTGG | 1 | 4.68367e-06 |
| AAACACTGGTGGAAGGTGTGGGTTGAGTGGCGGTCTACGT | 1 | 4.68367e-06 |
| AAACACTGTGGATAGGCCCCGGTAACGCGTGTTGCAGCAA | 1 | 4.68367e-06 |
| AAACACTTGTACACTGTGGGTCTGTGGGTCAAGATTCCCT | 1 | 4.68367e-06 |
| AAACAGACAATCACGGTGCGTCACGGTCGTTCCACGGACG | 1 | 4.68367e-06 |
| AAACAGACGGATTGTGCGGCGTGGCGGATAGACCGAGTGG | 1 | 4.68367e-06 |
| AAACAGACTGCCACGGGGGTTAATCAGCTTATGTTGACGT | 1 | 4.68367e-06 |
| AAACAGAGTGGTCTCGTCCCCGGGGGGTCGGGGGTTTGCG | 1 | 4.68367e-06 |
| AAACAGAGTTCCACAGTTGCGAGTATTCACTGCGCGCGCG | 1 | 4.68367e-06 |
| AAACAGATGTTGAGCTTCGATGCGCGTGGGAATAACGGCG | 1 | 4.68367e-06 |
| AAACAGCGTGATAGCGGTCGCGTGTACTGCGTGGGATTGG | 1 | 4.68367e-06 |
| AAACAGGCATAGCTTTCCACGCAAGGACTCATGTCGACGC | 1 | 4.68367e-06 |
| AAACAGGCCACGAGTTAGAGTGGGGCTATGTCGTCTAAGA | 1 | 4.68367e-06 |
| AAACAGGCGAGTGGGCAGTGGGAGGAGCTTGTGGGGTCCG | 1 | 4.68367e-06 |
| AAACAGGTATATGTAGGAATTGGGGCTGCGGTCGTCTATC | 1 | 4.68367e-06 |
| AAACAGTAGATTCTGTTTGGCGAAGCCGAGAGGCCGGATG | 1 | 4.68367e-06 |
| AAACAGTGTGCGACATGCCGTTACACGCGTGACAAGGGCG | 1 | 4.68367e-06 |
| AAACAGTTATTGACTCGGTGGACGCAATGCCGGGTGAGGT | 1 | 4.68367e-06 |
| AAACAGTTGGGGACAACGTGCCACCCATGAGTTGCCCACG | 1 | 4.68367e-06 |
| AAACATAATGAAGTGCTAGAATGGTCCACGCGTGCGATTG | 1 | 4.68367e-06 |
| AAACATACTCATAGAATTGAGGGCTAGCGTGGGGTGCGCA | 1 | 4.68367e-06 |
| AAACATAGTTGCCAATGCGTGGGTGTTCGGCCCGTGGACA | 1 | 4.68367e-06 |
| AAACATATTGGTTGAGTATGTGCCAGATTGGTTCCTAGAT | 1 | 4.68367e-06 |
| AAACATCATTATGCGTGACCGCCGCGTGCTAACATGTGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.