These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCGGGTTGGGTTGGTGTCCCTGGACCGCCACGGGTGCG | 1 | 4.68367e-06 |
| AAGCGGTCCCGTGGGTGGATCTAGGATTGTGGCGTGGTGT | 1 | 4.68367e-06 |
| AAGCGGTCGAGTGTGCGTATGGGTGAGGCTGCGGACGGGA | 1 | 4.68367e-06 |
| AAGCGGTCGGGTGAGCGTGAGGCGAGGCTGGAGTGGGGGA | 1 | 4.68367e-06 |
| AAGCGGTGGCCCAGCCTGTGTGCCTACCAGCTGTTCGATG | 1 | 4.68367e-06 |
| AAGCGGTTACCTGTACGTGGGCCTAAGTCGGACATAACGT | 1 | 4.68367e-06 |
| AAGCGTAAGTGGGAAGTGGGGACATGTGCGTGGCGGGCAT | 1 | 4.68367e-06 |
| AAGCGTAATGCGGCTCGTCACTTGCAAGACCTGCGGAGCG | 2 | 9.36733e-06 |
| AAGCGTAATGTCGCTGTGGGAGACACCCCGGGCTCGTGTA | 1 | 4.68367e-06 |
| AAGCGTACGAGGAGTAATTCCTATCAAGCGTACGTGTCTC | 1 | 4.68367e-06 |
| AAGCGTACGTGGACGGTAGTCGGCGACTGCTTGTGTGAGA | 1 | 4.68367e-06 |
| AAGCGTCACGTGGCGTGGACCGTGTCCGTATCGACTCCGC | 1 | 4.68367e-06 |
| AAGCGTCCCGTGATTTTATTCGTAAACAAGTGGGTAATGT | 1 | 4.68367e-06 |
| AAGCGTCCGCAGTTAGGGAACGTGGATGTAGGGGACGTGA | 1 | 4.68367e-06 |
| AAGCGTCCGTTCATGACGCCCTCGATTGGCGCTATTCGCT | 1 | 4.68367e-06 |
| AAGCGTCGAAGGCTAGAGTCTCGGATCCCTCAAAGGTCGT | 1 | 4.68367e-06 |
| AAGCGTCGCATTGGCCCCACGCATATGTGGTGCGATTGGC | 2 | 9.36733e-06 |
| AAGCGTCGCGGATCGCGTGGAATGTAAGTCTTAGGCGCTA | 2 | 9.36733e-06 |
| AAGCGTCGCGTCTCAGATTATGTGCGTGACGATCGTGGGT | 1 | 4.68367e-06 |
| AAGCGTCGCGTGGAATGGGTAAATCAAGGCCACTATGAGA | 1 | 4.68367e-06 |
| AAGCGTCGGAGTGCTCGAGATTTTTGAAGTTGGCCAGCGA | 1 | 4.68367e-06 |
| AAGCGTCTTTCTGCGGCACACGACGTTCGTGGGTGCTTGA | 1 | 4.68367e-06 |
| AAGCGTGATCGTGGAACCCGTCCGACTTGTTTGCTTTAAC | 1 | 4.68367e-06 |
| AAGCGTGATGTGAGACGGCCGTGGAAGGTGGGGGGAAACT | 1 | 4.68367e-06 |
| AAGCGTGGAACACGTGTTCAAAAACGTGCTGCCTCGTTTT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.