These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCTAGACATGTCCGCGCGTGGGGCCGTGGGTGCATCGG | 2 | 9.36733e-06 |
| AAGCTAGCACTAAGCAGCCTAAAGTGGGAAATATGTCCTC | 1 | 4.68367e-06 |
| AAGCTAGGAATGCGAATCTCCGGTCGAACTGAATATTCTG | 1 | 4.68367e-06 |
| AAGCTAGGCCCCTCGTGGAGATCGTGGGTGCCGCTACGGG | 1 | 4.68367e-06 |
| AAGCTAGGGTGGGTCACGCGTGGGTTATAACGTGTCGTGT | 1 | 4.68367e-06 |
| AAGCTAGGTCGTGGGCACTTCCTAGGCAGGAGGCCACACG | 1 | 4.68367e-06 |
| AAGCTAGGTGGGAACTTGCCTTGGCATGATACATGTTAGC | 1 | 4.68367e-06 |
| AAGCTAGTGGATCTGTTCGCTTTATTTCGGAACGCAGCGC | 1 | 4.68367e-06 |
| AAGCTAGTTCCAGCATACCATGGCCGGGCAGGGGGGGTGA | 1 | 4.68367e-06 |
| AAGCTATAGACGTGGACGCCGTGATTAGCCAGCCCGGGAG | 1 | 4.68367e-06 |
| AAGCTATCCCGTGTCACGGGCACCGGGAAGTGCTACGTGT | 1 | 4.68367e-06 |
| AAGCTATGAGTTATAGTTCCCCACGGGTCCCACGGTGGTC | 1 | 4.68367e-06 |
| AAGCTCCACGTTTACTAGTCTTGTCCGTTGTATTCACGTA | 1 | 4.68367e-06 |
| AAGCTCCACTGAGTAGTTACAGATCACGCGAACTGCCACG | 1 | 4.68367e-06 |
| AAGCTCCCACGCAGTACTTATGATCAAGGAGTTCATGTAT | 1 | 4.68367e-06 |
| AAGCTCCCGTCTGGGGGGGCGGATCGAGCGGCATGCGCGA | 1 | 4.68367e-06 |
| AAGCTCCGTGAGTGAAAGTGGCTGGTTTCGTGCCGTGGCG | 1 | 4.68367e-06 |
| AAGCTCCGTGAGTGAGTGAGTTTGTGGAGGGGGGCACGCA | 1 | 4.68367e-06 |
| AAGCTCGGATCAATGACGTGTTTGGGTGACTTTGGCTCCA | 1 | 4.68367e-06 |
| AAGCTCGGTTGTTAAAGAGATTCGTTGTGGTCGTGGGGGC | 1 | 4.68367e-06 |
| AAGCTCGTCGACGGGTGTTTCTACGTACACGACCTCCACG | 1 | 4.68367e-06 |
| AAGCTCTCGCGGCGTATAGTGGTTGGGGGCGCAAACTCCC | 1 | 4.68367e-06 |
| AAGCTCTGTGGAAAGCGCGTGAATAGGATGCGCGGTCTTT | 1 | 4.68367e-06 |
| AAGCTGAAATGTGTTTTGTATTCTGCACTCGAGAGTCTAG | 1 | 4.68367e-06 |
| AAGCTGAATTACGTGGGTGATTGAGACATGACGGTGGGAG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.