These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGAGGTGACACTGTGCGTGGGACATCAGCTGCACAACG | 1 | 4.68367e-06 |
| AAGGAGTAGGTGCGCGACCTGTATTGCCGAGTGTGGGGAT | 1 | 4.68367e-06 |
| AAGGAGTAGTCAATACGGTACCCAAACGACGATGTGCCCA | 1 | 4.68367e-06 |
| AAGGAGTCCACGCGTGAACCTAGTGGACGGCCGGGCCACC | 1 | 4.68367e-06 |
| AAGGAGTCCAGAGGTTGGGTGGAGAGTGTGGAATTACCCC | 1 | 4.68367e-06 |
| AAGGAGTGCGAGGGTCCCCTGTGGGCTTTCATTGCGTGTT | 1 | 4.68367e-06 |
| AAGGAGTGGTGACGTCGTGGGGGCTCTGTATGAGGATCGG | 1 | 4.68367e-06 |
| AAGGAGTGTATGCTGGATTCGCCCACGCTTTCGAGTTTAT | 1 | 4.68367e-06 |
| AAGGAGTGTGATGAGTCGCGTGGAGCGGGGAACGGAGCTG | 1 | 4.68367e-06 |
| AAGGAGTGTGGGTATTCCACGGGAGCGTGCTGAGTGTAAT | 1 | 4.68367e-06 |
| AAGGAGTTACTGTCTGTCCGCAGCGCTTACCCTTGCCACA | 1 | 4.68367e-06 |
| AAGGAGTTAGGAGCATAAAAGCGTGAGGGAACGGTTTGGG | 1 | 4.68367e-06 |
| AAGGAGTTCCACGCACGATATGGCGTGTGCAGCGACAGGT | 1 | 4.68367e-06 |
| AAGGAGTTGGATGACCTTGCTATACTACATCCACGTCTCG | 2 | 9.36733e-06 |
| AAGGATAAGGAGTGAAGACGCGTGGTTGGCTAGTGGGTGA | 1 | 4.68367e-06 |
| AAGGATACCGATCACGTGGCGTGGGAAAGGCCGTTAGGGC | 1 | 4.68367e-06 |
| AAGGATAGCTGTAGGAGGGGTTAGCGTAACTAATGGGGAA | 1 | 4.68367e-06 |
| AAGGATAGGGGTGTGGGCTACCCGTGTACGTGGGATCACG | 1 | 4.68367e-06 |
| AAGGATAGTTGTAGTGAGTGGGCGCCGGTGCGTGGGCGAT | 1 | 4.68367e-06 |
| AAGGATATCGCGTGGATCCTTGGGATTATCACCCGGTTGG | 1 | 4.68367e-06 |
| AAGGATATGGATATTGGGTCCGGGTGGAATGTGTGTTATA | 1 | 4.68367e-06 |
| AAGGATATGGGCGCACTAATCACATGGTCAGCGAGGTTGC | 1 | 4.68367e-06 |
| AAGGATCAGAGCATGGTGTGCGTGGGGTGGTATGGGAGGA | 1 | 4.68367e-06 |
| AAGGATCCGTCAGTATGTTATCGCTTGTTCACGCGTGGAA | 1 | 4.68367e-06 |
| AAGGATCCGTGGGTGTCGGGGGTAGCGTAGGCGTCAAGGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.