These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGATGTTGCGTGGGAATTATGGATGTAGCTAGGGGTTC | 1 | 4.68367e-06 |
| AAGGATTGATGGTCGCCTCGCGTGGGATTTGTGTGGACAA | 1 | 4.68367e-06 |
| AAGGATTGCGGCCGTGGGTTAGTGGGATAATGGCGTCGGA | 1 | 4.68367e-06 |
| AAGGATTGTCGACGAAGGTGATGGAGTGAGCGCGGCTGTG | 1 | 4.68367e-06 |
| AAGGATTGTGGATTTGCGTGGGCAGGGCCGTAGGGGGAAG | 1 | 4.68367e-06 |
| AAGGATTGTTAAACGCTGTATTGCGACGGTTAGGGATGCA | 1 | 4.68367e-06 |
| AAGGCAAAAGGTGCATGGCCACGCCAGTGGCATGGCGACT | 1 | 4.68367e-06 |
| AAGGCAAACTCTATGTGTGTGGCGGTCACGGCAGTGGGTT | 1 | 4.68367e-06 |
| AAGGCAAGCTTGGTTGTCAGTTGATAGGGCCTGTGCTAGG | 1 | 4.68367e-06 |
| AAGGCAATTCTGTTTAGGTCAGTCACGCACAAAATAACCT | 1 | 4.68367e-06 |
| AAGGCACAAGTTTGGTTGCGTGGACGAACTTGTGCCAGAG | 1 | 4.68367e-06 |
| AAGGCACGATGGACGTTGTAAGTCACGCGAGGGCCGTGAA | 1 | 4.68367e-06 |
| AAGGCACGCCTGGTGTTACTCCGATTCAACGGGTGTGGAT | 1 | 4.68367e-06 |
| AAGGCACGGGCGTGGGGTCTCGACGTGGGTGGGACGGTGA | 1 | 4.68367e-06 |
| AAGGCACGTCCCTCGGTACGGCATGGTCGGCGCTTATACG | 1 | 4.68367e-06 |
| AAGGCACGTTCCCCGCGCTATGATTTTGAAGAAATGCACC | 1 | 4.68367e-06 |
| AAGGCACTCTCCCACGATCCACGCGGGCAGGCAGTTTGCA | 1 | 4.68367e-06 |
| AAGGCAGACGAGACGTGTATTAATATGCAGATCCACGCAT | 1 | 4.68367e-06 |
| AAGGCAGGATGCGTGGAAGGGGAGGCGGCGTGGCATCGAG | 1 | 4.68367e-06 |
| AAGGCAGGGTGGTGAGAAGCACCGTGGAGGTGCGCGTGGA | 1 | 4.68367e-06 |
| AAGGCAGTGGTTTGCGCGGGGGCCTCCGCGCGCGTGGGTA | 1 | 4.68367e-06 |
| AAGGCATAGACGTTGGCGGGGCTGGGGTGATATGCGAGCA | 1 | 4.68367e-06 |
| AAGGCATCCCACAGCGGTTAGTTAACAAGGTAAAGGTGTC | 1 | 4.68367e-06 |
| AAGGCATCCCCATATGTGGCGGACCATGTTCGAATGAATC | 1 | 4.68367e-06 |
| AAGGCATCTGTGTCAGTTGCGTGGGCACCGGGTAGTCCTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.