These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGCCGTTTTGCTCACTAGTAGCCTATGTGCTTTGTGGA | 1 | 4.68367e-06 |
| AAGGCCTAAGTGGTTGGTGTGTGATGTGGAAGGGACAGTG | 1 | 4.68367e-06 |
| AAGGCCTCAGGTGTGGGCTCAGCTTTGGGGACATTTTATG | 1 | 4.68367e-06 |
| AAGGCCTCGATGCTCGGGCAGTGGTGAGATAGTGAGTCCG | 1 | 4.68367e-06 |
| AAGGCCTGAGGAGGCGCCGTCCACGCCCACGTTAATCATG | 1 | 4.68367e-06 |
| AAGGCCTGGCGTGCAGGGAGAACGGCGACCTTGAAGGATG | 1 | 4.68367e-06 |
| AAGGCCTGGGTATTTCATTCGGCGGGATGCGCCCACGGCG | 1 | 4.68367e-06 |
| AAGGCCTTAGTGCCGTAGGAAAGAGGTGGGATGAGGGTTC | 1 | 4.68367e-06 |
| AAGGCCTTCCGGCGTGCGCCCATGGGGAACGATTGGCGAA | 1 | 4.68367e-06 |
| AAGGCGAATTCGAGGGTGCAAATGGCCACGCGCGCGTCTG | 1 | 4.68367e-06 |
| AAGGCGACAATGGGCTGCTGGCGCACGGCGATTGCGTGGA | 1 | 4.68367e-06 |
| AAGGCGACGGAGGTGAGACCCGCCCGTGGGTGTCCGATTA | 1 | 4.68367e-06 |
| AAGGCGAGAGGCAGGACGTGTCGGATGGTGAGCGGACGGA | 1 | 4.68367e-06 |
| AAGGCGAGATGAAGGCGTCGAGGAGGTATTGAAACTCTCA | 1 | 4.68367e-06 |
| AAGGCGAGCCACGTGGATGGGGTGGGCAAGTAGCGTAGGG | 1 | 4.68367e-06 |
| AAGGCGAGGGGGGGCCGCAGCTGTCACGCGTGGGAGCCAT | 1 | 4.68367e-06 |
| AAGGCGAGTGGGGGGGCGTGTTCGAAACACATGGGTGAAG | 1 | 4.68367e-06 |
| AAGGCGAGTGTTATCGACGGTGTCGTGGACGTGAGAGAGG | 1 | 4.68367e-06 |
| AAGGCGCACTCCTCGTGGGGAATGGGACGGTCACGTCGTA | 1 | 4.68367e-06 |
| AAGGCGCCACGTCCAGTGGGAATTCTTGGTGTCTCACGCG | 1 | 4.68367e-06 |
| AAGGCGCGACCAAGGTCCACGGGAGGTCACTCGTGATCGG | 1 | 4.68367e-06 |
| AAGGCGCGACCGGATTCGTGGCTACGTGGCGCGTGGAAAA | 1 | 4.68367e-06 |
| AAGGCGCGTGTGGATCCACTGGTGAATATGGTAACGCGGG | 1 | 4.68367e-06 |
| AAGGCGCTATTCGGGATCCCAACGTAGATCGCGTGGGAGG | 1 | 4.68367e-06 |
| AAGGCGCTCTGGCATACGAAGTGGGGTTGGGGGCAAGAAA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.