These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGCGTGGGGATTTGGAGGTCCACGAGTGAGATTTGGTG | 1 | 4.68367e-06 |
| AAGGCGTGGGTGCGTTAGTCGGCGTGGGGGTCACGTTGTA | 1 | 4.68367e-06 |
| AAGGCGTGGGTGTAAGGGCGCGAGAATGACGGAGTGGAGA | 1 | 4.68367e-06 |
| AAGGCGTGGGTTGCGGGGTGGGGTAGGCCCGGGCAGTCCG | 1 | 4.68367e-06 |
| AAGGCGTTGAGTGGGTCCAGAAGTGCGAATGTCTGTGTGA | 1 | 4.68367e-06 |
| AAGGCGTTGTTTATTAGACGCGGGAGAGTGGGCGTAGCCT | 1 | 4.68367e-06 |
| AAGGCGTTTTATGGACTCGTATGTTTGGGGATAGAGGATG | 1 | 4.68367e-06 |
| AAGGCTACAGTGGAATTACCTTCAAGTTCGTGGGTCCGTC | 1 | 4.68367e-06 |
| AAGGCTACCGGACCGTGGGCGGCGGAACTCTGTGAGTGTA | 1 | 4.68367e-06 |
| AAGGCTAGGCCGTGGGCGTGCATGGTTGACACGTGTTGAA | 1 | 4.68367e-06 |
| AAGGCTAGTGAGGCCACGGGTGGACAAAGGCGCTTGACTC | 1 | 4.68367e-06 |
| AAGGCTATATGTACACGCCGGGTGACTGCGTGGGATATGG | 1 | 4.68367e-06 |
| AAGGCTCAGTGTGGGGTAAGGCATGGTGTGGGGCCGGACG | 1 | 4.68367e-06 |
| AAGGCTCCGAGTGGGCTAGTGATAAGTTCCGTGATGAAGT | 1 | 4.68367e-06 |
| AAGGCTCGCCAACACGATACGCGAGACCTATTTAGTGCGG | 2 | 9.36733e-06 |
| AAGGCTCGCTGTCGGGGCACGAGCCCGTGGGGCGGTGCGG | 1 | 4.68367e-06 |
| AAGGCTCGTGAAATGAGCGGGCGACTCGAGGGTGTGGGAT | 1 | 4.68367e-06 |
| AAGGCTCGTGGAAGTGATCCCATACGTGTTGGTATGTGGA | 1 | 4.68367e-06 |
| AAGGCTGAAGTTGCTGCAATGGGGTGAGACTAAAGGGTGA | 1 | 4.68367e-06 |
| AAGGCTGACATTATGGTACGTGGACGCGCGGGGGCGCCTT | 1 | 4.68367e-06 |
| AAGGCTGAGAGACGCTCTTCTCGCACGGTCGAGTGAACCT | 1 | 4.68367e-06 |
| AAGGCTGAGCGATCTTGTCGTTCCTCTGGTGCGTGGGGAC | 1 | 4.68367e-06 |
| AAGGCTGAGGAGTGGTGGTGCCTGCGAGGGCGTGGGTGTA | 1 | 4.68367e-06 |
| AAGGCTGAGGCACTGTCAGAAGTTCTCGTACTTAGTGGGG | 1 | 4.68367e-06 |
| AAGGCTGCGGTGGCATTGGGCGCGTGGACGATCAGGACAG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.