These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGGACTATAACGCGTGACGTGGAAAGTCTGAGTGGGGA | 2 | 9.36733e-06 |
| AAGGGACTCCTACAGCGTGGTGTGGTCACGTGGGCTTCTT | 1 | 4.68367e-06 |
| AAGGGACTCTGGAAGGCCTGGGGCGCATCGGGCCGTGGGG | 1 | 4.68367e-06 |
| AAGGGACTGATTAGGTAAGCATTGTTGCGAAGACGTGGCT | 1 | 4.68367e-06 |
| AAGGGACTGCCAGAGGTGCGTTGTCGGCGAGTCGTGGGAT | 1 | 4.68367e-06 |
| AAGGGAGCCCCGCGTGATAGGGCGTGTGTAGCTGCCGTGA | 1 | 4.68367e-06 |
| AAGGGAGGATAGGAAAGGGACGCGGCGCCGTGGGAGTGGA | 1 | 4.68367e-06 |
| AAGGGAGGGATGTCCACAGCGGGAAGAGGGAGCGTGGGTG | 1 | 4.68367e-06 |
| AAGGGAGGTACGGGCATCCACGGGGCCGGGCCGTTGTCCA | 1 | 4.68367e-06 |
| AAGGGAGGTCCACGAGTGTTACGGGAGCCACGCAATGGGG | 1 | 4.68367e-06 |
| AAGGGAGGTCGTGGGGGGTTACGATACTGCTAAGTATGAT | 1 | 4.68367e-06 |
| AAGGGAGGTGGGGTAAGCTCCATCTCGCGTGGCTGTGTGT | 1 | 4.68367e-06 |
| AAGGGAGTCACGCAACTAGAGTGGGTCATAGGACTTCGCG | 1 | 4.68367e-06 |
| AAGGGAGTCCTGGCTCCGGACTGCATTGTCTGCTATGACA | 2 | 9.36733e-06 |
| AAGGGAGTGGAATGGACACGGGTGGGGTGACTGGACACGG | 1 | 4.68367e-06 |
| AAGGGAGTGGTATCAATACTCGCAGTGATCGAGGGTCACG | 1 | 4.68367e-06 |
| AAGGGAGTTTGGAGGGAACGTGAGCGTGGGAATAGATCCC | 1 | 4.68367e-06 |
| AAGGGATAAGGAGCGGCGGTAGGCGGGGATGCGGCGCACA | 1 | 4.68367e-06 |
| AAGGGATAATCGTCGGGTGCCGGTCCGAAGAGCGTGGGTG | 1 | 4.68367e-06 |
| AAGGGATATCACACGCGCCGGCCTGTGGAATTGTTGATTG | 1 | 4.68367e-06 |
| AAGGGATCATCGAGTTCGTGTGGACGAGCGTCGTCAGTCA | 1 | 4.68367e-06 |
| AAGGGATCGCTTCGTGGGTGGTGGGTAGTAGGCGTGGGGC | 1 | 4.68367e-06 |
| AAGGGATCGTGGGAACACATTTAAAGTTCCAATAGTGGCG | 1 | 4.68367e-06 |
| AAGGGATCTCATAGAAGACTCCACGGCCCCGTTAGGGTCA | 1 | 4.68367e-06 |
| AAGGGATGGCCTTAGTGGGTTGCGACTACCGCGCGCGAGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.