These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGGTGGTCTTAGCACACGCGTGGGGATGTTCGCACATT | 1 | 4.68367e-06 |
| AAGGGTGGTGCGTGGCCTGCACACCTTCGACCACGCGTGT | 1 | 4.68367e-06 |
| AAGGGTGGTGCGTGGGAGGTGGAGCGGTATCCCGGGGGAG | 1 | 4.68367e-06 |
| AAGGGTGGTTCAGGTGTCGCGGGAACTTTGTCCACGCTGT | 1 | 4.68367e-06 |
| AAGGGTGTCGTAACTCGTGGGATTTAGGGAGGAGACCCCG | 1 | 4.68367e-06 |
| AAGGGTGTGTCCGAAGTCTGCACGTGGTGGTGCGCAGTGG | 1 | 4.68367e-06 |
| AAGGGTGTGTGACGTTTGAGGTGGAGGCGGAGTGATCCAG | 1 | 4.68367e-06 |
| AAGGGTGTGTGGAACATAATTACATCGTTTGTGCGTCATG | 1 | 4.68367e-06 |
| AAGGGTGTTAGTGTGTAAGCATTATCCTCTATGTAAGCCG | 1 | 4.68367e-06 |
| AAGGGTTAAGCAGCGTGCCGTGGGGGATGTGTAGGTGATC | 1 | 4.68367e-06 |
| AAGGGTTACTTGCTTCCACGCAGTGCCCCTGTGGTTCCGA | 1 | 4.68367e-06 |
| AAGGGTTAGCCGGGGGGACACGGTACCCACTGACGTGTGG | 1 | 4.68367e-06 |
| AAGGGTTATAGTGGGTAGGTGCATTACCGTGGGTTTTGTG | 2 | 9.36733e-06 |
| AAGGGTTATCAAGGTGGAGGGCCCACGGAGTGGGGATCGT | 1 | 4.68367e-06 |
| AAGGGTTATTCGTGCGTGAGTCGCTGGGACGATCATTTCT | 1 | 4.68367e-06 |
| AAGGGTTCCATAAAGGCACGATCACGCGTGTGCTGGTCCA | 1 | 4.68367e-06 |
| AAGGGTTCGGAGGAGTCCCACGCGTGCGTTGCGCAGTGCT | 1 | 4.68367e-06 |
| AAGGGTTCGGTGTGCGGGAGCCGTGTGGATGTGTGAGGTG | 1 | 4.68367e-06 |
| AAGGGTTCTTGTATGGTTCTAGCTACGTGGTACCACGGCA | 1 | 4.68367e-06 |
| AAGGGTTGAGTGTGTGTTCCCGTGGGGGGTCCGTGAGCTG | 1 | 4.68367e-06 |
| AAGGGTTGCAGTTCCAGGCACACGTGGGTGGTCAACGGCG | 1 | 4.68367e-06 |
| AAGGGTTGCGGGACCTTGGTTGATCGCGTGGGACCCGGCG | 1 | 4.68367e-06 |
| AAGGGTTGCGTAGGTTCGCGCAGTGTCTGTTCTCAGCATC | 1 | 4.68367e-06 |
| AAGGGTTGCTGGCGCGGTAGTGGGTCCCGTGGGTCGTGGG | 1 | 4.68367e-06 |
| AAGGGTTGGCGCAAAAATTAGGTAAACCGCCGAGGTGTGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.