These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTCGCATCAGCATCACCGGCCGGGGCCTCTTTGCTCAT | 1 | 4.68367e-06 |
| AAGTCGCATTTATGGCGACGGGCAGATGTCGTGGGAAGGT | 1 | 4.68367e-06 |
| AAGTCGCCCTTCGTGGGCCCGTGCGACTGCGTGGGAGTGG | 1 | 4.68367e-06 |
| AAGTCGCCTGCGTGGACACGGCGTGGTGTGGGCTGACGAG | 1 | 4.68367e-06 |
| AAGTCGCGATCAGTATCGAGCATGTCCACGGCAATGGTGG | 1 | 4.68367e-06 |
| AAGTCGCGCGGTGCGTGGGCTGATTGGGCGCACACACTTC | 1 | 4.68367e-06 |
| AAGTCGCGGGCCGGGCGTGGGGTGGTTAAAGAATTCAGTA | 1 | 4.68367e-06 |
| AAGTCGCGTCCAAATGGGCTTCTTCAGTAGGCGGGTGAAA | 1 | 4.68367e-06 |
| AAGTCGCGTGGAGCCACGGGGAGGGGAGCCATGGTCAGCT | 1 | 4.68367e-06 |
| AAGTCGCGTGGTAAGATGGCGGGTTAGGGTCGCGTGCGTA | 1 | 4.68367e-06 |
| AAGTCGGAGTTGAGTACACTTAGTGGGAAGGTTGGACTCG | 1 | 4.68367e-06 |
| AAGTCGGCATTGTCTTCTTATGCGTGGACGAGGAGGGGCG | 1 | 4.68367e-06 |
| AAGTCGGCCATTATTCGGGTGCGTGGGGTTGGGATCCACT | 2 | 9.36733e-06 |
| AAGTCGGCGATGGAATCCCGGACGGATAAGGGGACGCGAG | 2 | 9.36733e-06 |
| AAGTCGGCGTGGGCGTGGAAGCCCCGGCGGAGCGTGGGGG | 1 | 4.68367e-06 |
| AAGTCGGGATGAGATCGTTCAATTCCGTGTCGAGTGGGAG | 1 | 4.68367e-06 |
| AAGTCGGGTATGCTCGAGTTGCGTGGGATATGAGTGGGTC | 1 | 4.68367e-06 |
| AAGTCGGGTCGAGGGGCGTCGTGTCTTTGCCGGCGTGACA | 1 | 4.68367e-06 |
| AAGTCGGTAGCGGAGTGGGTTCGTCGCGCGTGATCGGTGG | 1 | 4.68367e-06 |
| AAGTCGTACGCGTCTGATGCGTGGATATAGGGACGTGACG | 1 | 4.68367e-06 |
| AAGTCGTAGCCAGTGGGGGCTTGTTGGGTGGAGCTCGCGC | 1 | 4.68367e-06 |
| AAGTCGTCCCCATGCTGGTATTTCCCACGGAGTACGTCCA | 1 | 4.68367e-06 |
| AAGTCGTGAAGGGGGACGCGTGTCGCCAGGTACGTGGGGG | 1 | 4.68367e-06 |
| AAGTCGTGGACAACGCCGGTACAAGAATTTCTGGTTTCCG | 1 | 4.68367e-06 |
| AAGTCGTGGGAGATTTAGGAACGCTTGGTGGTCCGTGGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.