These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTGGACTTCGGAGATGTCGTGCTTCATGTTCACGTATA | 1 | 4.68367e-06 |
| AAGTGGACTTGGTCACGGGAATGCGTGGAGGGGGCTAAGC | 1 | 4.68367e-06 |
| AAGTGGAGCAGGCCTACCACGCCAGTGCCTTTAAATGAGT | 1 | 4.68367e-06 |
| AAGTGGAGCGTGAACGATACGATGCGTGGGAGACGGGAGT | 1 | 4.68367e-06 |
| AAGTGGAGCTTTCGTGAGGAGCGCAGCGATGGCTCAGTCG | 1 | 4.68367e-06 |
| AAGTGGAGGAGTGGGGCCGCGTTCGGTTGTGGGATTCGTT | 2 | 9.36733e-06 |
| AAGTGGAGGGACCTGACACGTACCCCTCAGCATATTCACG | 1 | 4.68367e-06 |
| AAGTGGAGGGACTCGTGGGGGCGTGGAATTGGCTTGTGCG | 1 | 4.68367e-06 |
| AAGTGGAGGGAGGGAGCGGAGCGGCGTGACCGTGGGCCCG | 1 | 4.68367e-06 |
| AAGTGGAGGGTTGGAAGATTATGAATGTGCGTGGGCAGTC | 1 | 4.68367e-06 |
| AAGTGGAGGTTTGCACCGCCGTGTTACGATGCGTGGATCA | 1 | 4.68367e-06 |
| AAGTGGAGTGTTTTTACGGCCGCAGTTATCGGGTTGGACT | 1 | 4.68367e-06 |
| AAGTGGATAGAGGTGGAACTGATTACTGCAAGTTGAGATC | 1 | 4.68367e-06 |
| AAGTGGATCACGAGACGGACAGCGTTCAGCGCGGCCAGGC | 1 | 4.68367e-06 |
| AAGTGGATCAGATGCAACCACGTCCTACGTGGGTTTGAGT | 1 | 4.68367e-06 |
| AAGTGGATCATTAAGACTGCTCCGTGGATTCCGTGGCGCG | 1 | 4.68367e-06 |
| AAGTGGATCCCGTGGGGGCGGCAATTTTCTTGCGCTACAA | 1 | 4.68367e-06 |
| AAGTGGATCCTATGACGCTATAATCATCCGGTGGGCAGCG | 1 | 4.68367e-06 |
| AAGTGGATCGCGTGACGGTCGTCGCCACGGGCGTGTGGCT | 1 | 4.68367e-06 |
| AAGTGGATGGCGTCCCACGCAGCGGCTATCAGTGTGCGGG | 1 | 4.68367e-06 |
| AAGTGGATTGAGTGTAGTAAGATTGTTCTGGTGGGTAGAC | 1 | 4.68367e-06 |
| AAGTGGATTGCTGTGGTACATCCGTTTATCGTGGATGAGT | 1 | 4.68367e-06 |
| AAGTGGATTTAGGCCACGCCAAGACCATAATTCGCGTGTA | 1 | 4.68367e-06 |
| AAGTGGCACATCGGCGCGCTGTGCCGGTGGCCGGAATGCG | 1 | 4.68367e-06 |
| AAGTGGCACATGGTACAGATTTTTTGTCACGCAAGTCGTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.