These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTGGTGTCACGGGGGAGCTCGAAGTTGTGGCAGGCGTG | 1 | 4.68367e-06 |
| AAGTGGTGTGGGAACAAGGTGAGCGGTGGTGAGGATGCCC | 1 | 4.68367e-06 |
| AAGTGGTGTGGGAGACTGTGGGCCCAGAGTTCGTGGGGGT | 1 | 4.68367e-06 |
| AAGTGGTGTGGGCAAGAGCACGTCTCCGTGGATCCGGGTG | 1 | 4.68367e-06 |
| AAGTGGTTACTAGCTTTTTTGTAATCAATCTGGGGGGTGC | 1 | 4.68367e-06 |
| AAGTGGTTAGATGCTCCACGCAAGAATTTGCGGGGATTAC | 1 | 4.68367e-06 |
| AAGTGGTTCGGGCCCACGTGTTCGTTTGCACGGAGACGAG | 1 | 4.68367e-06 |
| AAGTGGTTCTCGGGAGGAGTGGTTTTCGCAGACCTCCTGT | 1 | 4.68367e-06 |
| AAGTGGTTTAGAGGAGGACGCGGTGGACGCCCCCTGTGCC | 1 | 4.68367e-06 |
| AAGTGGTTTAGGATTTAATTGGTTGTTGGAGTAACGCAGG | 1 | 4.68367e-06 |
| AAGTGGTTTGTGAATTTCGGGCCTGGCTTATAGTATGACT | 1 | 4.68367e-06 |
| AAGTGGTTTTCGCGGGTATCAGTGGTCACGGGGCACGGGC | 1 | 4.68367e-06 |
| AAGTGGTTTTTATGTGACCCGAATCCACGCTGTGGCGACA | 1 | 4.68367e-06 |
| AAGTGTAAGCCTGGTGCGCGAAATTCAACGTGGTGCGACT | 1 | 4.68367e-06 |
| AAGTGTAAGCTGCGTCGTGACCTGCGTGTAAGTCACGTAA | 1 | 4.68367e-06 |
| AAGTGTAATGCGTTTACCGGTAGGGCTCGTGTGTGGAGTG | 1 | 4.68367e-06 |
| AAGTGTACGAGGGATATTTCCCGTGACACTTGCGTGGTGA | 1 | 4.68367e-06 |
| AAGTGTACGTGGGCAAGACAACTAGGGACTGTGTAGTTTA | 1 | 4.68367e-06 |
| AAGTGTAGAGGGTCGTGATGATATAGTGCGTGGAAGGCGG | 1 | 4.68367e-06 |
| AAGTGTAGATACACTCGGGTAGTCAAGCTGTGTGGAATAT | 1 | 4.68367e-06 |
| AAGTGTAGTCTTTGCTCTATGCGTGGTCTCGGCAGTGGGT | 1 | 4.68367e-06 |
| AAGTGTATTAGGAGAACTTCGTTCTGAATCCACGCGAGTC | 1 | 4.68367e-06 |
| AAGTGTCACCTCGTGGACATGACATCTCTGTGATTGTCCC | 1 | 4.68367e-06 |
| AAGTGTCACGCGTGGACTCTTGAAACTGATTAATGCATCT | 1 | 4.68367e-06 |
| AAGTGTCACGCGTGTCTCGGAGTTAATGTGTAGAGCAGCT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.