These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAACTTGACGCGGATGAGATCGTGGGTGGCAGGTGCGAAA | 1 | 4.68367e-06 |
| AAACTTGATAGTGACGATCAAGTGCCGTGGGAGGTATTCA | 1 | 4.68367e-06 |
| AAACTTGGCCGTGGCAGGGGTAGTTGTGTGGAATCTAAGC | 1 | 4.68367e-06 |
| AAACTTGTCGCGTGAGTGGGGTTAGGGCCTAATTCGTGAC | 1 | 4.68367e-06 |
| AAACTTGTGAGTGAAATGGAGTGGATAAGCATCGTGGAAG | 1 | 4.68367e-06 |
| AAACTTGTTAGAGGGTGGGAGTTGCGAGGAGTGCCCACGC | 1 | 4.68367e-06 |
| AAACTTTCATAACGTTAGGTCCACCTCTTGGAGCAGAAGG | 1 | 4.68367e-06 |
| AAACTTTCCGAGCAGTGTGGCTGTGGTGGAGTACAGTGTG | 1 | 4.68367e-06 |
| AAACTTTCGTGGATAGTGCCTGGGGCATGGTATGAGAACA | 1 | 4.68367e-06 |
| AAACTTTGTACGCGGGCCCACGCGGGGAATACCAGATATC | 1 | 4.68367e-06 |
| AAAGAAACGACGGTACGCGTGATTTTGCGTGGTGAACCTT | 1 | 4.68367e-06 |
| AAAGAAAGGTCTTGTGCTAACGTCTTAACAGGGGATGAGC | 1 | 4.68367e-06 |
| AAAGAACGGGGTTGTGCTTCGGGTGTGTGGGATGATTGGC | 1 | 4.68367e-06 |
| AAAGAACGTGTCGGTGTACGCCAATTGCGTGGACGTGTGG | 1 | 4.68367e-06 |
| AAAGAACTAGTGAGCGTCCACGAGTGGGAAGGGCTGGTAT | 1 | 4.68367e-06 |
| AAAGAACTGAGTGCGTGCGTCCACGTGGGGGCGAGTGTTG | 1 | 4.68367e-06 |
| AAAGAAGATTTCCACGGAAGCCACGTCACGTCTCTGTACG | 1 | 4.68367e-06 |
| AAAGAAGCAATTCCACTGAACATTGCGTGGCGGGTGGAGC | 1 | 4.68367e-06 |
| AAAGAAGGCCGACGCAAAGAGGTTCACAGTTGTATGTTTG | 1 | 4.68367e-06 |
| AAAGAAGGGGGACGTTTCACGTGGTGTGAGTGGGAGCGCG | 1 | 4.68367e-06 |
| AAAGAAGGGGTCCGGGCGTGGGCCGTCACAGGGAGGAACG | 1 | 4.68367e-06 |
| AAAGAAGGGTGCATCACATGGTTTGGCGTGGCTTGCGTGC | 1 | 4.68367e-06 |
| AAAGAAGGTGATATCACGCGTGGACCGTAGTCAGTTAACT | 1 | 4.68367e-06 |
| AAAGAAGTACCTTGCCACGGGATAAGGAAGGTCCACGTTT | 1 | 4.68367e-06 |
| AAAGAAGTAGAGTGGGACTAATAGCACCGCCGTCAGCAGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.