These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGCGTGGGTAGATATCTCCGTGGCTCGTACCGGGCGTG | 1 | 4.68367e-06 |
| AAAGCGTGGGTCCGTGGACGAATGTTCCAGCTTGTGGAAT | 1 | 4.68367e-06 |
| AAAGCGTGTAATGCTTACGTCTGAGTGGGTGTATAGTTCC | 1 | 4.68367e-06 |
| AAAGCGTGTGCCGTGGCGCTACTGTGGGATGTGAAGGGCA | 1 | 4.68367e-06 |
| AAAGCGTGTTCAGTAGTGTTGGGGTGTGAACGTGGAAGGG | 1 | 4.68367e-06 |
| AAAGCGTTGATTGTGCGTGGAACGGTGTTAACTAAAGAGG | 1 | 4.68367e-06 |
| AAAGCTACCTAGGGTAACCCCAAGTCAGGGGCATATACTC | 1 | 4.68367e-06 |
| AAAGCTAGTTTTAGAGAAGGATCAAGGTCGCACAGGTGAT | 1 | 4.68367e-06 |
| AAAGCTCACATAACGCCTAATGACTTAAAGTGGGGACGAG | 1 | 4.68367e-06 |
| AAAGCTCACCGCGTGGCTGCCTGCTAGTGGGTTGTGAGAT | 1 | 4.68367e-06 |
| AAAGCTCAGCGGTACGCAACTATGGCGCGGGCCCACAGCC | 1 | 4.68367e-06 |
| AAAGCTCGTGTTGTCCGTGTGGACGGCACCATTGGAATCG | 1 | 4.68367e-06 |
| AAAGCTCTAGCATAGCGTGGATTGTTGGTGAGTGTTAAAG | 1 | 4.68367e-06 |
| AAAGCTGCCTAGTGAGCGTGGACGTGCGATTGCCGTGGTA | 1 | 4.68367e-06 |
| AAAGCTGGGTTATCCACGTGGGGCCCGAGAATGTATGGTA | 1 | 4.68367e-06 |
| AAAGCTGTCACAGATGGGTGGATTGGCACGGGTCACGGTC | 1 | 4.68367e-06 |
| AAAGCTGTGCGTGTGCGGACGTGCACCCATGTCCCGTCAC | 1 | 4.68367e-06 |
| AAAGCTTCGCGAACCCCCGCCGTGGCAACCGTATGTGGGT | 1 | 4.68367e-06 |
| AAAGCTTCGGCGTGGGGGTCCACCGCGACCGGGTTTAGTA | 1 | 4.68367e-06 |
| AAAGCTTTTGCAAGTTTCTCCGTAAATGCTGAGATGTCCA | 1 | 4.68367e-06 |
| AAAGGAAACCTGCTGGCAGGTGCTGCGTGTAGCTTCCACG | 1 | 4.68367e-06 |
| AAAGGAAAGGTCTCGATCCGACACGGGTGGGGGCGCATCG | 1 | 4.68367e-06 |
| AAAGGAAATGCGAAAAAGGATCGTGCGGGGCGCAAGGATA | 1 | 4.68367e-06 |
| AAAGGAACGCGCGTGGACGCGGAGGATAGTCGGAGAAATT | 1 | 4.68367e-06 |
| AAAGGAACGTGGGTGCCGGGGCTTTCAAGTGTGTGGGATT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.