These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATCACGCGCGGGTTCGTTATAGGGGTCGCGCGTGGGTA | 1 | 4.68367e-06 |
| AAATCACGGCGAAGAGCGTGGATAACGAGGAAGTGAAGGC | 1 | 4.68367e-06 |
| AAATCACGGGATGTCCCACGCCTGGAAAGGCAGGGATGAG | 1 | 4.68367e-06 |
| AAATCACGGGCGCATTTTCAAGTGGAGAGTGCCGCGTGGT | 1 | 4.68367e-06 |
| AAATCACGTCCTGGGTGGGTCGATGTTGCGTGTCGCGCGT | 1 | 4.68367e-06 |
| AAATCACGTTGAGCATGAAGCGTGCGACAGGAGGGCGTCA | 1 | 4.68367e-06 |
| AAATCAGCCATGTCATCGATAGTGTAATGCGTGGATTGAA | 1 | 4.68367e-06 |
| AAATCAGCGCGTGCGAACTGGGTGGGCGTGGGGTCGAATC | 1 | 4.68367e-06 |
| AAATCAGTCTATGGCTACTCGACAGGATTGTACGTTGCTG | 1 | 4.68367e-06 |
| AAATCATAACAGTGTCAGGGAGTGGTACCATCCAGTTCGC | 2 | 9.36733e-06 |
| AAATCATATGGCCTGGTGACGGCTCGGCCGTGGCGGTCCG | 1 | 4.68367e-06 |
| AAATCATGTCCCACGCGGCCCACGCGCGAGATATGATTAA | 1 | 4.68367e-06 |
| AAATCATGTGGCTTGGTAGAATGGATCTGTACAAAAGGTT | 1 | 4.68367e-06 |
| AAATCCACAGCAGGAAGGTTAAGAGCTGGCTTGTGACAAA | 1 | 4.68367e-06 |
| AAATCCACAGTGAGTGTAGCGCACTCGCTTGCCTCGTTGT | 1 | 4.68367e-06 |
| AAATCCACCGACGTAGTGTGAGGGCGTTCCGCAGCGTGGC | 1 | 4.68367e-06 |
| AAATCCACGACATCTAGTCGAGTGGGTGACGTGGAGTGGC | 1 | 4.68367e-06 |
| AAATCCACGCACACGGGCGCTCACGGTCCTGTGAAAATCT | 1 | 4.68367e-06 |
| AAATCCACGGAGGAGGTGAGTGTGTCGATGGGTCGTAGAG | 1 | 4.68367e-06 |
| AAATCCACGGATGGGCCACGGATAAGGGCGGACGACGCAG | 1 | 4.68367e-06 |
| AAATCCACGTGCTGGGGCCGTCCACCGGAGAGGGTGGCGT | 1 | 4.68367e-06 |
| AAATCCACGTGTGGCAGTGGGGCGTGTTGGGGATATCCCT | 1 | 4.68367e-06 |
| AAATCCACTAGTGAGTCGTGTTTTAGACGGTTCCGGCCCA | 1 | 4.68367e-06 |
| AAATCCCGTCGAGGCGTTGCGTGGTGCCATCAGTGGAAGC | 1 | 4.68367e-06 |
| AAATCCCTAGTGACGTGTGGATTATGGGCTTTCGTGGGTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.