These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATCGGCCAGATGGCAAGAGGTGATGGTGTGTAGTACTT | 1 | 4.68367e-06 |
| AAATCGGCGGCGTGGAATGTACAAGAGTCGTGTTGTTGTT | 1 | 4.68367e-06 |
| AAATCGGCGTGAGACCGTCCACGGGGCGGTCGCGTGGGTT | 1 | 4.68367e-06 |
| AAATCGGGGGCGGGGCGGGGCGCGTTGGGTAGTAGTCACG | 1 | 4.68367e-06 |
| AAATCGGTATGGTTACACGTGGGGTGAAGGGGTGGAGGAA | 1 | 4.68367e-06 |
| AAATCGTAATCTCATCCAGGTCTAAATTTCCACGGATATA | 1 | 4.68367e-06 |
| AAATCGTAGTGTCACGCGTGGGCTTAGGGCTGTCGCACTG | 1 | 4.68367e-06 |
| AAATCGTATACGTGGGGCGTGGGAACGGGACGGACGGCCC | 2 | 9.36733e-06 |
| AAATCGTCGCGTGGACGTTCGCGGGTACGGAGCGGCGTGT | 1 | 4.68367e-06 |
| AAATCGTGAGCTGCGTGGCCTTAGCCGTGGGGAAACGCCT | 1 | 4.68367e-06 |
| AAATCGTGATGGCTTCACGTGGTCTAAGCGGCGTTCGTGG | 1 | 4.68367e-06 |
| AAATCGTGGAGTTCGTGACCTTTTGTGTGGGAGATGGATG | 1 | 4.68367e-06 |
| AAATCGTGGATTCTGCACCTCGTGAAGTAGGTGCGGTTGT | 1 | 4.68367e-06 |
| AAATCGTGGGATAAGCACGGGGGGATGCGCGTGGGCAGCG | 1 | 4.68367e-06 |
| AAATCGTGGTTTGCGGGGTGCCGGGAAGAATTGCGTGGGT | 1 | 4.68367e-06 |
| AAATCGTTGCGTGGGGAGGACGTAATGTGGATCGAAGCGA | 1 | 4.68367e-06 |
| AAATCTACCACGGCAACGCAAGGTATCACACTATACGTCT | 1 | 4.68367e-06 |
| AAATCTACTTGGGTGGATTCGGTGATTCTCGTGGAATAAG | 1 | 4.68367e-06 |
| AAATCTATGCAGGAGATGCGTGGGTCAGCGTACAACGCGG | 1 | 4.68367e-06 |
| AAATCTCACTTGTCTAGAGCGGTTGCAGTCTTAATCTTAA | 1 | 4.68367e-06 |
| AAATCTCAGGCTTAGACAGTGAGGGCTTCCGGGGCCTGGC | 1 | 4.68367e-06 |
| AAATCTCCGCTGTCCATTCCACTTCCACAGAAGACTAGTG | 1 | 4.68367e-06 |
| AAATCTCGTGGATATAGGGGTCGCAACCTAACGGTTAGTC | 1 | 4.68367e-06 |
| AAATCTCTCGTGATCACGTGCGTGTCGTGCCACTCCAATA | 1 | 4.68367e-06 |
| AAATCTGCGGAGGACCGGGTAGGAGGGTTAGGCAGTGATG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.