These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATCGCTACACTATAGCGCGTGGGCATTGCATCCTGCC | 1 | 1.53513e-05 |
| AAAATCGGAGCTTGATTTCGTTTACGTGACGCGTAGAGTT | 1 | 1.53513e-05 |
| AAAATCGGCTACGTGGGCTTAATGAGCTTAGGTAGGTACA | 1 | 1.53513e-05 |
| AAAATCTCCTATTACTTGACTCGGTGCGTGGAATCGGCTG | 1 | 1.53513e-05 |
| AAAATGAATGTATAGTCATTCTTTACGCTCGTTAGACGCT | 1 | 1.53513e-05 |
| AAAATGACTGGGCGAACACTGGCTCGTCTCAACTTTAGTC | 1 | 1.53513e-05 |
| AAAATGCGTATGTAGGATTGGAGTGCAGGAATTCTCAGAC | 1 | 1.53513e-05 |
| AAAATGCGTGTTTGGGTGTGGAGAGGGATGTGTTCTTCCG | 1 | 1.53513e-05 |
| AAAATGCTATCGCGTGATCCGGTTTATCTGCGGTGTGTGG | 1 | 1.53513e-05 |
| AAAATGGAAGTTGATTGAGTGCGTGAGTTACCTCATGACT | 1 | 1.53513e-05 |
| AAAATGGACGTCAATAACACGAGGCCATTGTGATCTATGT | 1 | 1.53513e-05 |
| AAAATGGATAGTTGGCGGCCTGAGAGCAGGGTGCGTCTCA | 1 | 1.53513e-05 |
| AAAATGGTTGCGGGCGGGTGCCGCGTGGGCACACCTGTGC | 1 | 1.53513e-05 |
| AAAATGTAATGGTAGCGTTCGTAGCATGGTTGATGATCTA | 1 | 1.53513e-05 |
| AAAATGTATCGGTATACACGGTAACGCGGTGATTTCACGC | 1 | 1.53513e-05 |
| AAAATTACTGGCAGTGAGAGTGAGCGTCAAGCGGTTGTGT | 1 | 1.53513e-05 |
| AAAATTATGTTTCACGTTCTCGGGACTTCGCACGTAGACA | 1 | 1.53513e-05 |
| AAAATTATTGAACACCCTAGCTCTGTCTCACGGCAGGAAA | 2 | 3.07026e-05 |
| AAAATTCAGATGATTCTGACATTTGTCAATCTCGTGGGAT | 1 | 1.53513e-05 |
| AAAATTCTGCGGTTTTAAACGCACAGGTCGGCGAATGTAG | 1 | 1.53513e-05 |
| AAAATTGAGTGACACGTGCTTATGGATGGGGGGCGTCCCG | 1 | 1.53513e-05 |
| AAAATTGTCGATATCGATGTAACCTAGTTTTCGGGTTAGT | 1 | 1.53513e-05 |
| AAACAAATAGCGATAGGGGGGGAAATTGAGTGTTAGCAAT | 1 | 1.53513e-05 |
| AAACAAATGAAACACTCACGCGTGTGGAGGTGCTCTGTTA | 1 | 1.53513e-05 |
| AAACAACTGCCCTTCGTTCTCACTTTGATCTTGGGGGTTC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.