These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTTAGACCCACGGCGAGGACGCTCGAGGGGAGGCGTAG | 1 | 1.53513e-05 |
| AACTTAGATACTCGAAGAGAGGGGAGGGATTCGGATTCAG | 1 | 1.53513e-05 |
| AACTTAGGACAGAGATGGCAATCATAGGGAGTATCCGACC | 1 | 1.53513e-05 |
| AACTTATTATGGGGTGGAAGTGTAGTGGAGGGAGGCGGCG | 1 | 1.53513e-05 |
| AACTTCAAAAGCTTAAGGAGTCTTGAATTTTTGTGGACCC | 1 | 1.53513e-05 |
| AACTTCAACTCATATCCAGGCTTATGGGATAGGCCCGCAG | 1 | 1.53513e-05 |
| AACTTCAGTGTATAGGACTAGATGGGTTGGTCTAAAACGC | 1 | 1.53513e-05 |
| AACTTCCATACAAGGTGTGATTAAGGTAAGTCCGTGGATG | 1 | 1.53513e-05 |
| AACTTCGAGGGTGGGTGTTTCGGGAAGAGGGTATGAGTTG | 1 | 1.53513e-05 |
| AACTTCGCGGTGTCACTCGGTGTGCTGTGCACCTGAACGG | 1 | 1.53513e-05 |
| AACTTCGGGAAGGATCGGGTCGTATTCTCTATGGTGTCAC | 1 | 1.53513e-05 |
| AACTTCGGTGTCGCAGCGTAAGAGCGCAGTGGGGTTAGAA | 1 | 1.53513e-05 |
| AACTTCGTGGGAAAAAGGATTCCCGAGAGCGACGTTCTCT | 1 | 1.53513e-05 |
| AACTTCGTGTATTTCCTCGATTTGGTTACGGGGGTCCCTA | 2 | 3.07026e-05 |
| AACTTCTTGCAATATAATTTAAGTGGCTATGTTTTGGTTT | 1 | 1.53513e-05 |
| AACTTGAGGGCGCTAAACTCCCACCTCTACGTGTTGGGGT | 1 | 1.53513e-05 |
| AACTTGCAGGTGTAGAGAGTGTGAACCTCTGTGCGTTTGT | 1 | 1.53513e-05 |
| AACTTGCCGCCGAGGAGTTTATTCACGCGAGGGAGTCATA | 1 | 1.53513e-05 |
| AACTTGGGGAAGGTGTTCCGGGTGTGAGAGACGCAGGTGC | 1 | 1.53513e-05 |
| AACTTGGTTATGCTGGTGCTTGCAGGGGACTGCTGGACTA | 1 | 1.53513e-05 |
| AACTTGTCGATTTACAGAGACTCAACAGTGGTTTGGTGTA | 1 | 1.53513e-05 |
| AACTTGTCGCGGGATAACTAAGGACTGACATGAAGGTAGA | 1 | 1.53513e-05 |
| AACTTGTGTGGAGGTCTGCGTGTAGTGCGCTAGGGGCGTG | 1 | 1.53513e-05 |
| AACTTGTGTTTGTTCCATGGTGGCTCCGGTGGTACCCGTT | 1 | 1.53513e-05 |
| AACTTGTTCTGGGGATCGAAGCCCTCCACGGAGACTGAAA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.