These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTCGCCCGCTTTGGATTAACTGGAGTGGGGCCAGGAGC | 1 | 1.53513e-05 |
| AAGTCGCCGGTGGCGTTAGCGGGGAGGCCTTAGGTGGGTC | 1 | 1.53513e-05 |
| AAGTCGCCTGGCGTCTGTTAGTGCTTCGCGGTTCATGCCT | 1 | 1.53513e-05 |
| AAGTCGCCTGGGTCTAAGCGCGCAATGCTGGTGCCCGGAA | 1 | 1.53513e-05 |
| AAGTCGCTTTTCAGGGAGTGAATGCTGGCCCATCTGCGTG | 1 | 1.53513e-05 |
| AAGTCGGAGATCGTGTCGTGTTGTGGTGGTTGTTAGGTAA | 1 | 1.53513e-05 |
| AAGTCGGCCCCTGTGGGGTCGGTCGTGGACTCTGACTACT | 1 | 1.53513e-05 |
| AAGTCGGCCCTGGGGGTGTGGGTCAAGACGAGACTGCGAA | 1 | 1.53513e-05 |
| AAGTCGGGACGTATGGGCCATTAAATACCCATGGTGCTCA | 1 | 1.53513e-05 |
| AAGTCGGTTGAAGGCAGTGGATAATGGGTTTTCCAGGGTG | 1 | 1.53513e-05 |
| AAGTCGTAAAAGCTATCCAGTTATGCTGGGGGGAGCGTGG | 1 | 1.53513e-05 |
| AAGTCGTACCTCGCGTCGTTTTCGGTGGCGTTTTGCCCGG | 1 | 1.53513e-05 |
| AAGTCGTATTGCTAGGGCGCGCGGCTCGGGCTGCGTTTCA | 1 | 1.53513e-05 |
| AAGTCGTGAAACATGCTTTATTTGGGGTGCTTTGTGTAAA | 1 | 1.53513e-05 |
| AAGTCGTGGACGTAGCTGCTTTGGTATTGAGGTGCTCGAA | 1 | 1.53513e-05 |
| AAGTCGTGGCAGTGGATAGATGGCTGATTGGGTCCTCCAG | 1 | 1.53513e-05 |
| AAGTCGTGGGGACTGGTTGTCGCGTATGCCGGGGGAACCC | 1 | 1.53513e-05 |
| AAGTCGTGGTGGATTCTGATCGTCACCATATGTTGTGTTA | 1 | 1.53513e-05 |
| AAGTCGTTGCCATGCAAGGTCAGATAGGTGAGTATCAGTC | 1 | 1.53513e-05 |
| AAGTCGTTGGTCCAGAAGATTTTTAGTAACTTGATGGGAG | 1 | 1.53513e-05 |
| AAGTCTACCACAAAACAGGTTATCGTACGGAACGGTGGTT | 1 | 1.53513e-05 |
| AAGTCTAGACGCTGTGACGTTCTTCTGTAAACGGAGCTCG | 1 | 1.53513e-05 |
| AAGTCTATGGGTACTTGCACGACATGCTGTTGAGTTTACC | 1 | 1.53513e-05 |
| AAGTCTGACGTCCTGCCTTTACTATACTTGGTTGCGGTTG | 1 | 1.53513e-05 |
| AAGTCTGACGTGGAAGGTGCACTCGAGATTTGCCACTCGT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.